Rhizobium acidisoli: CO657_30005
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Entry
CO657_30005 CDS
T06438
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CO657_30005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_30005
Enzymes [BR:
rad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CO657_30005
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CO657_30005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QAS82111
UniProt:
A0AAE6C521
LinkDB
All DBs
Position
pRapFH23c:238506..239147
Genome browser
AA seq
213 aa
AA seq
DB search
MNIVASVGPALALDVAEAESIAQLRHQAESCTRCDLYRNATQIVFGEGPRKTEIVLVGEQ
PGDQEDVAGRPFVGPAGRLLDRCLEEAGLDRRRCYVTNAVKHFKFTQRGKRRLHAKPNAG
EIKRCAWWLGAEINILEPKLVVTLGASALYALLGSKVKLTPERGHILQPANHPPVLVTIH
PSYLLRIRDEAEQQRLRLDFVSDLHKAAEFGAR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgttgcaagcgtcggccccgccttggcgctcgacgtcgcggaagcggaaagc
atcgcccaactgcggcatcaggccgaaagctgcacccgctgtgatctctacaggaatgcc
acgcagatcgtcttcggtgaagggccgcggaaaaccgagattgtccttgtcggcgaacag
ccgggcgaccaggaggatgtggccggtcggccgtttgtcggtcccgccggccggttgctc
gatcgctgccttgaggaggccggccttgaccggcggcgctgctatgtcaccaatgccgtc
aagcacttcaagttcacccaacgcggcaaacggcggctgcacgccaaacccaatgccggc
gagatcaagcgttgcgcctggtggctcggcgcggagatcaacatcctcgaaccgaaactc
gtcgtcaccctcggcgctagcgcgctttatgccttgctcgggtcaaaggtgaagctgacg
ccggaacgcggccatatcctacagccggctaatcatccgcctgtcctcgtcaccatccac
ccctcttatctcctgcgcatccgcgacgaggccgagcagcagcggctgcgcctggatttc
gtgtcagatctgcacaaggcggccgagtttggcgcgcgctga
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