Rhizobium acidisoli: CO657_30045
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Entry
CO657_30045 CDS
T06438
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rad
Rhizobium acidisoli
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rad03032
]
CO657_30045
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_30045
Enzymes [BR:
rad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CO657_30045
DNA replication proteins [BR:
rad03032
]
Prokaryotic type
DNA Topoisomerases
CO657_30045
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO657_30045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QAS82117
UniProt:
A0AAE5WTB2
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All DBs
Position
pRapFH23c:complement(242895..243899)
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AA seq
334 aa
AA seq
DB search
MNAEAITELGLVYVSDAEPGIRRRRKGKGFSYVMPDGTTLADELQRARIGALGLPPAYEN
VWICLYDNGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGRALPKIRRTVLRHL
DTGTEDIDGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGQIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPIDSGRLNAYLAEISGIPI
SAKTFRTWAGSLAAFGAARETIVGGGRPTVKQMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIESAEPLRGLRAEENRLLDFLTRETEE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagccatcaccgaacttggtctcgtctatgtcagcgacgccgaaccaggc
atccgcaggcgaaggaagggcaagggcttcagctatgtcatgcccgacggcacgacgctt
gccgatgaattgcagcgggcgcgcatcggcgcgcttggcctgccgccggcctatgagaat
gtctggatctgcctctatgacaacggccatctgcaggcgaccggcatcgatgcccgcggg
cgcaagcaataccgctatcacaaggactggcaatccttccgaagtgcgggaaaatttcac
cagctgatcgaattcggccgggcgttgccgaagatacggcgcaccgtgctgcgccacctc
gacaccggcacggaggatatcgacggcgtgcttgcggcgctgaccacgctgctcgacgag
gcgcatttgcgcgtcggcaaccaggcctatgtccgggagaacggcacctatggcgcaacg
acgctgctgaagcgccatctgaagattgtcgatgggcagatcgagctgaaattccgcgcc
aagggcggcaagcgcgtccagcgcagtctcaagcatccacggctgcagaaaattctggag
gagatcgccgacctgcccggccgccagctgttcgtctggaaggatgaaagcggagcgctg
aagccgatcgattccggccggttgaacgcctatctggccgagatatcgggcattcccatt
tcggcgaagaccttccgcacctgggccggctcgctcgccgccttcggcgcggcgcgcgag
acgattgtcggcggcggccggccgacggtgaagcagatgtcggaggcggctgccgaggct
ctgcacaacacaccggcgatctcgcgctcgagctatatccatcccgcaatcattgcgctt
gccggcaacgatcatccgctgatcgagagcgccgaaccactgcggggcttgcgggccgag
gaaaacaggctacttgatttcctcacacgcgagaccgaggaatga
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