KEGG   Riemerella anatipestifer RA-CH-2: G148_0996
Entry
G148_0996         CDS       T02438                                 
Name
(GenBank) hypothetical protein
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rae  Riemerella anatipestifer RA-CH-2
Pathway
rae03030  DNA replication
rae03430  Mismatch repair
rae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G148_0996
   03430 Mismatch repair
    G148_0996
   03440 Homologous recombination
    G148_0996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rae03032]
    G148_0996
   03400 DNA repair and recombination proteins [BR:rae03400]
    G148_0996
Enzymes [BR:rae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G148_0996
DNA replication proteins [BR:rae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G148_0996
DNA repair and recombination proteins [BR:rae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G148_0996
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 RNase_T tRNA_anti-codon DNApol_Exo
Other DBs
NCBI-ProteinID: AGC40300
LinkDB
Position
1054074..1058726
AA seq 1550 aa
MYLIFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQLHDEEGNLVENQDYIIKPEGYDIPF
NATRIHGISTKMAHEQGRDLVEILEEFKEVLKKTKIVAGHNIEFDYNIVGAEFYRKSIEN
VLEKIPSADTMALGTDYCQLGGGRNGKYKPPKLEELYEKLYGEKFDEAHNAAADVNATAQ
VFFEMMRVGIIPAETLKISEEQLKVYQENHPSPIRPFAIVIRRQVEDFNKKKKRTDFGDI
SEIELGDYFNFHNHSIFSSLQSTTSIGDLIDKAKSNQFPAVGMVDLGNMMGAFKFVSDVE
KYNSGVKKAHQEYLANKQKAEEEGADFNENAPESKELMAVLGCEFYISDRPEQKQFTKDD
PDRRTNVVLLAKNFNGYKNLAKLSSLGYVNGFYFGVPRVSREMVAQYKDDVIAVTSGIYG
DIPDAILNFGEQKGEERFKWWKETFGEDFYVQLQNHGLQEEEHLNEVLLDFADRYNVKIL
AQNETFYTDKSDANIQDIVSCIKDGEKLSTPVGKGFGKRKGLRSQEFYIKDAEELKQCFR
QYPDAFEAYTELLSKFEPYTLKRDVLLPKFDIPEEFQSEEDLKDGGKRGENAYLRHLTYE
GAKKRYDEITDDIRERLDFELEIIANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAAGS
AVAYCIGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDRIIKWVIDKYGKSNVA
QIITYSVLGGKSAIKDAGRVLDVPIPETNNIAKLVPSVPGMNIAKALSKYDKLKDEDKVL
VDEMKAVLDNPNDQRFPVLDSAKKMEGCIRNTGIHACGVIITPEDISNLVPISIAAKDAD
ILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKERHGIDINPDEISLDDAKTYQL
FKEGRTIGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGVEEI
IYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMYPK
FIEGGKKNNLDEEKLNKIWNDWKAFAEYAFNKSHSTCYALIAYQTAFLKANYPAEYMASV
MSNNINNTAQITMFMEDCRAMGVDVLGPDVNESQYKFSVNDKGQIRFGLGAIKGIGEGPS
EAISQERAKGKFKNIYDFFERVTPSQVNKRVVESLVMAGAFDEVDTYHRAQYFDIDNSGK
TNIEKLIRYGQSFQESKNEVENSLFADFAEEIQIEQPKIAPAMEWQNMHKLNKEKEIIGF
YLSAHPLDEYKYQFRFIQGELSKKEVLSQKDEILEELQSIPKESVLIEDTEDEPDLAVDL
DLVEGEDGEIIEEEVKNVEPKGSFNFLNLDEVEAFKDSIASGINPNLFSEKEAWKELRKI
NDAAKEYTVAGLITEYTIRDGKNSGEKIAFLTLEDYSGSYGFRLGDRDYMRLREKLALQR
FVIIKIKMVISKDGRVFVNINEVIDLKDAFEKYAKSLSIVADITDIRRADIEFFQNDLLS
HQGEHKLSFYLKNPNDETKLELPSIQRKINISAELLYKIQEYNKYQIFLN
NT seq 4653 nt   +upstreamnt  +downstreamnt
atgtatcttatttttgacacggaaactacgggattgccaaagaattttaatgctccatta
tcagattcggataactggccgagaatggtgcagattgcttggcagttgcacgatgaagag
ggtaatttagtggaaaatcaagattatatcatcaagcccgagggttatgatattccgttc
aatgctactaggatacatgggatttctactaaaatggctcacgagcagggacgagatttg
gtggaaattttagaagaatttaaagaggttcttaaaaaaacaaaaatagtcgctggacac
aatattgagtttgattataatattgtgggggcggaattttatagaaagtccatagaaaat
gtgttagaaaaaattccgtctgccgatactatggcacttgggacagactactgtcagctt
ggaggaggtaggaatggaaagtataaaccgcctaaattggaagaactttacgaaaaactc
tatggtgaaaaatttgatgaagctcacaatgctgctgccgatgtaaatgccacggcgcaa
gtcttttttgaaatgatgcgtgttgggattattcctgcggaaacgcttaaaatttcggaa
gagcagcttaaggtttatcaagaaaaccacccgagtcctattcgtccgtttgcgattgtt
atcaggaggcaagtagaggattttaataaaaagaaaaaaagaaccgattttggcgatatt
agtgagattgaactcggtgattatttcaattttcataatcatagtatcttttcatcttta
cagtctaccacttccataggagatttgattgataaggctaaaagtaatcagtttcctgct
gttggtatggtggatttgggtaatatgatgggggctttcaaattcgtttctgatgtagaa
aaatacaattctggtgttaaaaaagcccatcaagaatatttagctaataaacaaaaagcg
gaagaagagggtgcagatttcaatgaaaatgctccagaatctaaagaacttatggcagta
ttgggctgcgaattctatatttctgaccgtccagagcaaaaacaatttactaaagacgac
cctgacagaagaactaatgttgtgcttctcgctaaaaacttcaatggttataaaaactta
gcgaagctgtccagtttaggatatgttaatggtttttattttggtgtacctagggtgtct
agggaaatggtggcacagtataaagacgatgttattgcggtaacatcgggtatttatgga
gatattccagatgctattttaaatttcggagagcaaaaaggagaagaacgatttaagtgg
tggaaggaaactttcggtgaggatttttatgttcagcttcaaaatcacggtttgcaagaa
gaggagcatttgaatgaagttttgttagattttgcggatagatacaatgtgaaaatttta
gcccaaaatgaaactttttataccgataaatctgatgctaacattcaagatattgtaagt
tgtatcaaagatggcgaaaagctgtccacaccagtaggaaaaggctttggcaagagaaaa
ggattgaggtctcaagagttttatatcaaagatgcggaggaactcaagcagtgctttagg
cagtatccagacgcttttgaggcttatacagagctgttgtcaaaatttgaaccttatact
ctaaagagagatgtcttattgcctaaatttgatattccagaagagtttcaatctgaggaa
gatttgaaagacggtggcaaaagaggagaaaatgcatacctgcgacatcttacttatgaa
ggagcgaagaagcgttatgatgaaattacggatgatataagagaaaggttagactttgag
ctagaaattattgctaatacaggctacccaggatatttcttgattgttcaagatttttgt
aacgaagctagaaagatgggggtatgggtaggtcctggtaggggttcggcggcaggttcg
gcggtggcttattgtattgggattaccaatgtagaccctataaaatatgacctccttttt
gagcgttttttaaatcctgaaagaatttcaatgcccgatattgatattgattttgatgat
gaaggacgggacagaatcattaaatgggttattgataaatacggtaaatctaatgtagca
cagattattacttactccgttttgggaggtaaatcggcgattaaagatgcgggtagggtg
ctagatgtgcctattccagaaaccaataatattgcgaaacttgtaccttctgtcccagga
atgaacattgctaaggctttgtctaaatacgataaacttaaagatgaagataaagttttg
gttgatgaaatgaaagcagttttagataatcctaacgaccagcgtttccctgtgttggat
tcggcaaaaaaaatggaaggttgtattagaaatacgggaatccatgcctgtggggtgatt
attacacctgaagatatttctaatttggtgcctatctcgatagcggctaaagatgccgat
attttggtctctcagtttgataactcggtggcagaaagtgcggggcttttaaaaatggac
tttttagggttgaggactttaaccattattaaagatgcgcttaaactcgtaaaagaaagg
cacggtatagacatcaatccagatgaaatttctttagatgatgctaagacttatcaactt
tttaaagagggaagaaccatagggattttccaatacgaaagtcctggtatgcaaaaatat
atgagggaattaaagcctaccgtttttgcggatttaattgcgatgaatgccttgtatcgt
ccaggtccaattaagtatattcctaactttatcaatcgtaaacacggggttgaagaaatt
atttacgacctcccagagaccgaagaataccttaaagaaacttacggaattactgtttat
caggagcaggtaatgcttttgtctcaaaaattggcaaactttactaaaggtgaagcagat
acattgaggaaggctatggggaaaaagcagatagatgttcttaataagatgtatcctaaa
tttatagaaggtggtaaaaagaataatctagacgaagaaaaacttaataaaatctggaac
gattggaaggcgtttgcggaatatgcatttaacaaatctcactctacttgttatgcactt
attgcttatcaaacggcgtttttaaaggcaaattatccagccgagtatatggcgagtgtg
atgagtaataacattaacaacacggcacaaatcacaatgtttatggaggattgtagagct
atgggcgtagatgttttaggaccagatgttaatgaaagtcagtataagttttcggtgaat
gataaagggcagataaggtttggtttaggagcgataaagggaattggtgaaggtcctagt
gaagcgattagccaagaaagagcgaaaggaaaatttaaaaatatctatgacttctttgaa
agagtaacaccgtcacaagtgaataaaagagtggtggagagtttggtaatggcaggagcg
tttgatgaggtagatacttaccatagagcacaatattttgatattgataattctggcaaa
accaatatagagaagcttattagatacggacaaagtttccaagaaagcaaaaatgaggtg
gaaaactctctttttgcagatttcgcagaggaaatacaaatagaacagcctaaaatagca
ccagctatggagtggcaaaatatgcataaactcaataaggagaaagaaattattgggttc
tatctatcggctcatcctttagatgagtataaatatcagtttcgctttatacaaggtgag
ttgagtaaaaaagaggttttatctcaaaaagatgaaatcttagaagagttgcaatctatc
ccgaaagaatctgttttaatagaagatacagaagatgagccagatttagcggtagattta
gatttggtagaaggtgaagatggcgaaataatagaggaggaagttaaaaatgtagaacct
aaaggcagttttaattttttaaatttagatgaagtggaagcctttaaagacagtattgcg
agtggtatcaatcctaatttattctctgagaaagaggcttggaaagagttaaggaaaatt
aatgatgctgctaaagaatataccgtggcagggctaattacagaatataccataagagat
ggtaaaaatagtggcgagaaaattgcatttttaactttggaagattatagtgggtcgtat
ggtttccgtttaggcgatagagattatatgcgtcttagggaaaaattggctttacaaagg
tttgtgattattaagataaaaatggtaatttccaaagacggtagggtttttgtgaatata
aatgaagtgatagaccttaaggacgcttttgaaaaatatgcaaaatcactatccattgtg
gcggatattactgatattagaagagcagatattgaattcttccaaaacgatttactctct
catcaaggagaacataagttaagtttttatcttaaaaaccctaatgatgaaacgaagcta
gagctaccgtcaatacagaggaaaatcaatataagtgcggagcttttgtataaaattcag
gagtataataagtatcagatatttcttaactag

DBGET integrated database retrieval system