Riemerella anatipestifer RA-CH-2: G148_1222
Help
Entry
G148_1222 CDS
T02438
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rae
Riemerella anatipestifer RA-CH-2
Pathway
rae00061
Fatty acid biosynthesis
rae00071
Fatty acid degradation
rae01100
Metabolic pathways
rae01212
Fatty acid metabolism
rae02024
Quorum sensing
rae04146
Peroxisome
Module
rae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G148_1222
00071 Fatty acid degradation
G148_1222
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G148_1222
09145 Cellular community - prokaryotes
02024 Quorum sensing
G148_1222
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rae01004
]
G148_1222
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rae04147
]
G148_1222
Enzymes [BR:
rae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G148_1222
Lipid biosynthesis proteins [BR:
rae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G148_1222
Exosome [BR:
rae04147
]
Exosomal proteins
Exosomal proteins of breast milk
G148_1222
Exosomal proteins of breast cancer cells
G148_1222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGC40526
LinkDB
All DBs
Position
complement(1298984..1300768)
Genome browser
AA seq
594 aa
AA seq
DB search
MSVTRLFDFAYKAIENHPKEDMLTTKYNGVWQKTSTLKFINMGNKISRGLLKLGIKPGDK
ISLISTNNRTEWAVMDLGISQIGTVTVPVYPTISVEDYIYIFNNAEIKYCFVSDKELYQK
LLSVQPSVPSLVGIFTFDKVEGAPNWAEILDLGEDEATQIEVEDLKKGIKTDDLASIIYT
SGTTGRPKGVMLTHQNIVSNVLTCTPILSEKKPQNTNLKSLSFLPICHIFERMLFYFYIN
SGISIYFAESIDKMGENIKEVQPHYMTVVPRLIEKVYDKIYDKGISAGGLKAKIFLWALG
VNKAKKGIGKPSGLKEIIADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGISI
LEGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKIQGDGEISVKGPSVTKGYYKDDEK
TQEAFTEDGYFKTGDIGHIDDEGFLHITDRKKEMFKTSGGKYIAPQMIENMAKASKFIEQ
IMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGTTPEEIAKSPQLKARIEKEIEHLNTK
LGSWEKIKKIELTPEVWSIDSGLLTPTLKLKRKMIKQRFIELYNNMYGHIDGEE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaactaggttatttgatttcgcttataaggccatagaaaatcatccaaaagaa
gatatgctaaccactaagtacaacggtgtttggcaaaagacttccacacttaagtttata
aacatgggaaataaaatttctcgtggacttctaaagttaggaataaaaccaggagataaa
atttccttaatctctactaataaccgcacagaatgggcagtgatggatttaggaatttcc
caaataggaactgttactgtacctgtataccctactatttctgttgaagactacatttac
atctttaataatgcggaaataaaatattgctttgtatcagacaaagaactatatcaaaaa
ttattatccgtacagccaagtgtaccttctttagtggggatatttacctttgacaaagta
gaaggagctcctaactgggctgaaatattagacttaggagaggacgaagctactcagata
gaagtagaagatttaaaaaagggaattaaaactgatgatttagcttcaattatctatact
tcaggaaccacgggacgtcctaaaggagttatgctaacccaccaaaatatcgtatctaat
gtactaacttgtacacctatactttcagagaaaaaacctcaaaatacaaatttaaagagt
cttagctttcttcctatctgccatatctttgaacgaatgttattttacttctacatcaat
agtggcatatctatctactttgcggaaagtatagataaaatgggtgaaaatatcaaagaa
gttcaacctcattatatgacggtagttcctaggcttatagaaaaggtatacgacaaaatc
tacgataaaggcataagtgcaggcggtcttaaagctaaaatcttcttatgggcactaggg
gttaataaagctaaaaaaggaattggtaaacctagtgggcttaaagaaattatcgccgac
aaactcgtatttaaaaagtggagagaaggtttaggaggaaatatcattacccttatatca
ggctccgcagccttagcacctagacttaacagaatgttccaaaatgcaggcatcagtata
ttagaaggttatggacttacagaaacttcccctgtaattgcagtaaacacattcaataaa
atgaaagtaggaaccgtaggtcctgtacttccaaatttagatgttaaaattcaaggagac
ggtgaaatatcggtaaaaggtccttcggttactaaaggctactataaagatgatgagaaa
actcaagaagcttttacagaagatggctactttaaaactggagatataggacatatagat
gatgaaggatttttacacattaccgacagaaagaaagagatgtttaaaacatctggtggt
aaatacatcgctcctcagatgatagaaaatatggcgaaagcctccaaattcatagagcaa
ataatggttgtaggtgaaggtgaaaaaatgccttgtgctttggtacaaccagactttcac
ttcgctgtaaattgggcagaaagacacaacatcaatattggtacaactccagaagaaatt
gctaaaagccctcaattaaaagctcgtatagaaaaagaaatagagcatctaaataccaaa
ctaggaagctgggagaaaataaagaaaatagagcttacacctgaagtttggtctatcgac
agcggactacttactcctactctaaaactaaaacgaaaaatgattaaacaaagatttata
gaattgtataataatatgtacggacatatagacggagaagaataa
DBGET
integrated database retrieval system