Riemerella anatipestifer RA-CH-2: G148_1420
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Entry
G148_1420 CDS
T02438
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rae
Riemerella anatipestifer RA-CH-2
Pathway
rae03420
Nucleotide excision repair
rae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G148_1420
03430 Mismatch repair
G148_1420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rae03400
]
G148_1420
Enzymes [BR:
rae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G148_1420
DNA repair and recombination proteins [BR:
rae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G148_1420
MMR (mismatch excision repair)
Other MMR factors
G148_1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGC40724
LinkDB
All DBs
Position
complement(1504599..1506938)
Genome browser
AA seq
779 aa
AA seq
DB search
MVDYLKGLNEAQYKAVTTIQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFT
NKAAREMKERIAKVVGESDAKSLWMGTFHSVFARILRSEAHYLGFPSNFTIYDSQDALNV
LKKVIKDLNIDSDLYKPKKVQARISQYKNNLITVRAYYNNPELMENDARANMKLIGQIYQ
KYVEVCFKNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPGAVTVSLEQNYRSTQNIVNAANV
VIAKNQQQFKKNVFSANEEGEKLKVYRSLSDADEANFVAANIWELHNSQQRMFNEFAILY
RTNSQTRAFEDALRRKNIPYRVYGGLSFYQRKEVKDLLAYLRLLVNENDAEALTRIINYP
VRGIGETTQNKLIVYADGQGLSLAQVLSDLPFHTPRLGLNNSALNKLNDFWQMIKAFQVM
LKTENAYTVAMEVAKRSGLIKNLKDDQTPEGISRLENIQELMNSMQGFIEEQQQLEEGDA
SLSNFLENIALSADTQDKPDGSEDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSSS
REELEEERRLFYVALTRAEKQAYLSYAVSRFQWGKITDSEPSRFLSEIDAQYLDFLNASM
ERHFVNHSGIKSNIFDDTPSAPIAFKKKEPKKTLNRAETSLQPKEPKKLKPLASAKINNP
VGGTTQDIQVGDRVRHDRFGMGEVIFIDGTDATNIKAKVRFEHEGEKNLILKFARLEKL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatttgaagggattaaatgaagctcagtacaaagcagtgactacaatacag
ggaccactaatggtattggcaggagctggttctggtaaaacgcgtgtgcttacgatgcgt
attgcacatctaatcaccaatggagtagacccttttaatatacttgcacttacctttacc
aacaaagccgctagagaaatgaaagagagaattgccaaagtggtcggagaaagcgatgct
aaaagtctatggatggggactttccactcggtttttgcaagaatattgaggagcgaggct
cattacttaggatttccttccaactttaccatttacgactctcaagatgctcttaatgta
cttaagaaggtcatcaaagaccttaatatagattcagatttatacaaacctaaaaaagta
caagccagaatatctcaatacaaaaacaatctcatcaccgtaagggcttactataacaat
cctgaacttatggaaaacgatgcccgagcaaatatgaaactcattgggcaaatttatcag
aaatatgtggaagtttgttttaaaaacggagcaatggattttgatgacttgcttctgaga
accaacgaacttctcacgcgttttcctgaagttcttgcaaaatatcaagacagatttaga
tacattttagtagatgagtatcaggataccaaccattctcaatatcttattgtaaaggct
ttagcctccaaatttgaaaatatatgtgtggtgggagatgatgcccaatctatttactct
tttagaggagctaatatttataacattctgaactttaaaaaagattatccaggtgccgta
acggtttcactagagcaaaactaccgttctacacagaatattgtaaatgctgctaatgtg
gtgattgctaaaaaccagcaacagttcaaaaagaatgtatttagtgctaatgaagaaggc
gaaaaacttaaagtttaccgttcactttcagatgccgacgaagccaactttgttgccgcc
aacatttgggaactgcacaactctcaacaaagaatgttcaatgagtttgctattttatat
agaacaaactctcaaaccagagcttttgaagatgctttaaggcgaaaaaatattccatac
cgtgtctatggcggattgtccttttatcaaaggaaagaggttaaagatttactagcctat
ctaagacttttggtaaacgaaaacgatgccgaggcactcacaagaatcatcaactatccc
gtgagaggcataggcgaaactacacaaaataaacttattgtttacgcagatgggcaaggg
ttatctttagctcaagttctatcagatttaccatttcacacacctagattagggcttaat
aattcggctctcaataagctaaatgatttttggcaaatgataaaggcattccaagtgatg
cttaaaaccgaaaatgcttataccgttgcaatggaggtagctaaaagaagtgggctcatc
aaaaacctaaaagacgaccaaactccagaaggaatttctaggttagaaaacatacaagaa
ttgatgaactcaatgcaaggtttcattgaggaacagcaacaacttgaagaaggtgatgct
agtctttccaattttttagagaacattgccctttcggcggatactcaagacaaacctgac
ggtagcgaggatatggtttctctaatgacaatacatctttccaaagggttagagtttcct
gtggtacaccttgtggggttagaggaaaacctgtttccgagttttatgagcagtagttcc
cgagaagaattggaggaggagcgaagactcttctatgtagctttaactcgtgccgaaaaa
caagcctatctttcttatgcggtttctcgtttccaatggggaaaaattacagactcggag
ccgagcagatttcttagcgaaatagatgctcaatatttagacttccttaatgcaagtatg
gaaaggcattttgtaaatcattcagggattaaatctaatatttttgatgataccccatca
gctccaattgcttttaaaaagaaagaacctaagaaaactctcaatcgtgccgaaacgagt
cttcagcccaaagaacctaaaaaactaaaaccgttagcatcagctaaaattaacaatcct
gttggtggaacaacgcaagatatacaagtaggcgatagagtaagacacgataggtttggt
atgggagaagttatttttattgatggaactgatgctaccaacattaaagcaaaagttcgc
tttgaacacgaaggcgaaaaaaacttgattttaaagtttgctagactagagaagctctaa
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