Riemerella anatipestifer RA-CH-2: G148_1528
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Entry
G148_1528 CDS
T02438
Name
(GenBank) Superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rae
Riemerella anatipestifer RA-CH-2
Pathway
rae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G148_1528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rae03019
]
G148_1528
03400 DNA repair and recombination proteins [BR:
rae03400
]
G148_1528
Enzymes [BR:
rae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G148_1528
Messenger RNA biogenesis [BR:
rae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G148_1528
DNA repair and recombination proteins [BR:
rae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G148_1528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
AGC40832
LinkDB
All DBs
Position
1625725..1627929
Genome browser
AA seq
734 aa
AA seq
DB search
MTKKTYNLAEELKKYFGFSTFKGQQEAIISTLLGGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSEEGVAHVLNSSLNKTQIKQVFSDINSGRTKLLYVA
PESLIKEDYLDFLKQANISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTA
TATPKVQDDIQKTLGMSDAVVFKESFNRPNLFYEVRPKVDVEKEIVKFINKNKGKSGIVY
CLSRKKVEEFAQTLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEV
GLQLLNEVVGYAETSMSRRQYILYYFGEEFDPINGAGAKMDDNSVNPPKLKDVTNDFKTV
LNLIKSLEEKFKTKDLIAVLVGKETPTTKSYKLEKSEFFGIGKETSDNYWKSIIRQATVR
GYIIKDIETYGVLRVSKKGQNIISGKDKEPFLIAEDREYDLAQTKADSDQVQLQGGGGLD
KVLFNQLKDLRKKIAQKQGIPPYTVFMDPSLEDMTVQYPITIEEIAKVYGVGEGKAKKFG
KEFAEFIKKYVEDNNIERPDDMVLKKVANKSSHKVFIIQNTDKKIDLEDIANAKNLSMDE
LISEMESIVYQGTKLNIDYYIEENFDEEMVDDFMEFMKESESDSMKVLLAEFGEELSDDE
VRLLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaacatacaatttagcagaagaactcaaaaagtattttggattttctacc
tttaaaggacagcaagaggcaattatcagtacacttcttggaggcaaagacatatttgta
cttatgcctactggcggaggtaaatctctttgctatcagcttcctgcacttatttcagaa
ggtacagctattgtggtatctccactcattgccttaatgaaaaaccaagtagatgcagtt
aatgggctttcttcagaagaaggagtagctcatgtacttaattcttctcttaataaaaca
cagataaaacaagttttcagcgacatcaatagcggaagaaccaaactcttgtatgtagct
cctgagtcattgataaaagaagattatttagattttttaaaacaagctaatatttctttc
gtagccatagatgaggcacattgtatctccgaatggggacacgatttccgaccagaatac
agaaacttaaaaggtattatagataaaatagctaatgttcctgttattgcccttacagca
acggctactcctaaagtacaagatgatattcagaaaacattgggaatgtctgatgcggta
gtttttaaagaaagctttaaccgaccaaatctattttacgaagtgcgcccaaaagtagat
gtagaaaaggaaattgtaaaattcatcaataaaaataaaggaaaatcagggatagtttac
tgccttagccgtaaaaaagtagaagaatttgcacagactttacaagttaatggcatcaat
gctctgccctaccacgctgggttagaccaaaaaacaagagtagctaatcaagataaattc
ttaatggaagaatgtgatgtcatcgtagctaccatcgcttttggtatggggatagataaa
cctgatgttcgttttgtgatacattatgatttccctaaatctttagaaagttattaccaa
gaaacaggtagagctggtagagacggcggcgaaggacattgtttagcattctacgaccct
aaagatattgaaaaactagagaaatttttagcccaaaaatctgtttcagagaaagaagtt
ggcttacagttactgaatgaagtagtaggatatgctgaaacctctatgagtagaagacag
tacatactttattactttggtgaggagtttgacccaattaacggtgctggtgccaaaatg
gacgacaactctgtaaatccacctaagctaaaagatgttacaaacgattttaaaaccgta
cttaacctcattaaaagtttagaagaaaagttcaaaactaaagacttaatcgctgttctt
gtaggcaaggaaacaccaaccaccaaatcctataagttagagaaatccgagttctttggt
ataggtaaagaaacttcggataattattggaaatctatcattagacaagctacggtgaga
ggctatattattaaagacatagagacttatggagtgcttagagtgagcaagaaaggacag
aatattatttctggaaaagacaaagaacctttcttaattgccgaagatagagagtacgat
ttagctcaaactaaagcagattcagaccaagtacaactccaaggtggtggtggacttgat
aaagttctatttaatcagcttaaggatttaagaaagaaaatcgctcaaaaacaaggcatt
cctccttacaccgtgtttatggacccaagtttagaggatatgacggtgcaataccctatc
actatagaagaaattgcaaaggtttatggtgtaggtgagggtaaagctaaaaagtttggg
aaagaatttgccgagttcatcaaaaaatatgttgaagataacaacatagaacgccctgat
gatatggtgctaaaaaaagtagcaaacaaatctagccacaaagtgttcatcattcagaat
acagataaaaagatagatttagaagatattgctaatgctaaaaacctttcgatggacgag
cttatttccgaaatggaaagtatcgtttaccaaggcacaaaactcaatatagattattat
atagaggagaattttgacgaggaaatggtagatgactttatggagtttatgaaagagtct
gaaagtgatagcatgaaagtccttttagcagagtttggcgaagagttgagcgatgacgaa
gttcgcctgcttagaattaagtttattagcgatgtagccaactaa
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