Riemerella anatipestifer RA-CH-2: G148_1875
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Entry
G148_1875 CDS
T02438
Name
(GenBank) Uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rae
Riemerella anatipestifer RA-CH-2
Pathway
rae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G148_1875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rae03400
]
G148_1875
Enzymes [BR:
rae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G148_1875
DNA repair and recombination proteins [BR:
rae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G148_1875
Prokaryotic type
G148_1875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGC41179
LinkDB
All DBs
Position
1974294..1974935
Genome browser
AA seq
213 aa
AA seq
DB search
MTWTEVLAPIKNSSYFKNLWQKVKQEYHQYKCFPPKEQIFRAIELTPFEEVKVVILGQDP
YHNDFQANGLCFSVSDQVPAPPSLRNIFKELQDDLGIIKTSNKLDSWAKQGVLLLNATLT
VKAHEANSHKDLGWETFTDFIIKEISDKKENIVFVLWGSFAQKKAQFIDAHKHYIIKTAH
PSPLSAHRGFLGSKPFSKINNYLLSKNKEEIKW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacttggactgaagtattagcacctataaaaaattcctcttactttaaaaatttatgg
caaaaagtaaaacaggagtatcaccagtataaatgctttcctcccaaagaacaaatattt
agagctattgagcttactccttttgaagaagtgaaagtcgtaattttagggcaagaccct
tatcataatgattttcaagctaacggattatgtttttctgtatcagaccaagtacctgca
ccaccatcactaagaaatattttcaaagagttgcaagacgatttaggtataattaaaacc
agcaacaagctagactcttgggcaaagcaaggcgtacttctactaaatgctactcttacc
gtaaaagctcacgaagcaaactctcataaagatttaggttgggaaacatttacagatttc
atcattaaagaaatatcagataaaaaagaaaatattgtttttgtgctttggggttctttt
gcacaaaaaaaagctcagtttatagacgcacataagcattacattataaaaacggctcac
ccttctcccctatcagctcacagaggctttctaggtagcaaacctttctccaagataaac
aattatcttctatcaaaaaataaggaggaaattaaatggtaa
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