Rickettsia africae: RAF_ORF0229
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Entry
RAF_ORF0229 CDS
T00979
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
raf
Rickettsia africae
Pathway
raf03030
DNA replication
raf03430
Mismatch repair
raf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAF_ORF0229 (holA)
03430 Mismatch repair
RAF_ORF0229 (holA)
03440 Homologous recombination
RAF_ORF0229 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raf03032
]
RAF_ORF0229 (holA)
03400 DNA repair and recombination proteins [BR:
raf03400
]
RAF_ORF0229 (holA)
Enzymes [BR:
raf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAF_ORF0229 (holA)
DNA replication proteins [BR:
raf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAF_ORF0229 (holA)
DNA repair and recombination proteins [BR:
raf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAF_ORF0229 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ACP53191
UniProt:
C3PMN1
LinkDB
All DBs
Position
250294..251268
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AA seq
324 aa
AA seq
DB search
MKFYFSQIGRLFELITSGKIRALLLYGPDKGYIEKICKHLVQSLNMLQTSIEYADLNISS
LEILLNSSNFFGQKELIKIRSVGNSIDQNLKTILNSDYINFPVFIGEAITSSGSIRKFFE
TEEYLAAVACYHDDEAKIERIILGKVAKTNKVISKEAIIYLKAHLKGDHDLICSEINKLI
YFVHDAREITLNDVLEVISSEITANGSDLAMYFSKKDYSNFLQELDILKKQNINEVLIIR
ALIRHYLSLYIVLSKVKNGERLELAIKSLSPPIFYQYINDFTKIANGLSLTECLKTLKVL
QQAEVDYKLNPASFDLFQSILQSK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttatttttcacaaataggtagattatttgaactaataacatccggaaagatt
agagctcttttactatatggtcctgataaaggttatatagaaaaaatttgtaagcattta
gtacaaagcttaaatatgctacaaacttctatagaatacgcagatcttaatatttcatct
ttagaaatattacttaattcgtctaatttttttggtcaaaaagaattaattaaaattaga
tcggttgggaattcaatcgatcagaatttaaaaacaattctaaacagtgattatataaat
tttcctgtatttataggtgaagcaataacttctagtgggagcattagaaagttttttgaa
acggaagaatatttagcagcagttgcttgttatcatgatgatgaagcaaaaattgaacga
attattttaggtaaagtagcaaaaactaataaagttataagtaaagaagctatcatttat
ttaaaagctcatttaaaaggtgatcatgatttaatttgtagcgaaataaataaattaata
tattttgttcacgacgcacgcgaaattactttaaacgacgttctagaagttataagtagc
gaaattacggcaaacggcagtgatttagcaatgtatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatatattaaaaaaacaaaatatcaatgaagttttaattattaga
gcattaataaggcattatttaagtttatatatagttttgtcgaaagtaaaaaacggtgag
cgtttggaactcgcaataaaatcattatcaccaccgattttctatcagtatattaatgat
tttacgaagatagcaaacggtcttagccttactgaatgtctaaagactttaaaagtgcta
caacaggcagaagtggattataagttaaatcctgctagtttcgatttattccaaagtata
ctccaaagtaaatga
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