Rickettsia africae: RAF_ORF0384
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Entry
RAF_ORF0384 CDS
T00979
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
raf
Rickettsia africae
Pathway
raf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
raf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RAF_ORF0384 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
raf03016
]
RAF_ORF0384 (trmU)
Enzymes [BR:
raf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RAF_ORF0384 (trmU)
Transfer RNA biogenesis [BR:
raf03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RAF_ORF0384 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
ATP_bind_3
DUF7411
ThiI
Motif
Other DBs
NCBI-ProteinID:
ACP53321
UniProt:
C3PN11
LinkDB
All DBs
Position
411222..412319
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AA seq
365 aa
AA seq
DB search
MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD
IYDAKMVANKLGIPHYVLDYESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDLIKT
ARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGGLTK
DETRKLASKFGLEVADKPDSQDICFIPDGNYKSVINKIRPNSSESGKIIHVNGFELGEHS
GIINYTIGQRRGLGIAYNEPLYVVKIDPKDNVVYVGPESALNVQEFIIRDVNWLADEIKD
NEKLEVAVKIRSTRPPRLAEISKFGDDKMKVKFLCEEKAVAPGQACVIYAGARVLGGGWI
TREIR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttaggggataagcagtctactatagttgtcgcaatgtcaggcggggttgat
agttcggcggttgccgcaatgctgcatgaacaaggacataatgttataggtattaccttg
cagctatatgatcacggtatggcagtagggaagaaaaatgcctgttgtgccggtcaggat
atttacgatgctaaaatggtagcaaataagctaggtattccccattacgtacttgattat
gagagcaaatttaaagagtcggtaatagataatttcgtcgatagctatttacaaggtgaa
acaccgcttccatgtgtgcaatgtaataaatcggtaaagttcagggatctaattaaaacg
gctagagagcttggagcagataagcttgctaccggtcattacgtacgaaaaataaacggt
gataacggagcggaattacatacagggcttgatccagcaaaagatcaaagttatttttta
tttacgacaactaaagagcaattagaatatttacgtttccctctaggagggcttactaag
gatgaaacacgaaagcttgctagtaaatttgggcttgaggtagcagataagcccgacagc
caagatatttgtttcatacctgacggaaattataagagcgtaataaataaaatacgtcca
aatagcagtgaaagcggtaaaattattcatgtaaacgggtttgagctaggagagcatagc
ggtataattaactacaccatagggcaacgtcgtggtcttggtatagcttataatgagcct
ttatatgtagtaaagattgatcctaaggacaatgtagtatatgtaggaccggagtccgca
ttaaacgtgcaggaatttatcattagagatgtgaattggcttgcagatgagattaaagat
aacgaaaagttagaagtagcagttaaaattcgctcgacaagaccgccgcgtctagccgaa
ataagtaaattcggtgatgataaaatgaaagtaaaatttttatgcgaagaaaaagccgtt
gcccctgggcaagcatgcgttatttatgccggtgcaagagtacttggcggcggatggatt
actagagagataaggtaa
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