Rickettsia africae: RAF_ORF1020
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Entry
RAF_ORF1020 CDS
T00979
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
raf
Rickettsia africae
Pathway
raf03030
DNA replication
raf03430
Mismatch repair
raf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAF_ORF1020 (dnaQ)
03430 Mismatch repair
RAF_ORF1020 (dnaQ)
03440 Homologous recombination
RAF_ORF1020 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raf03032
]
RAF_ORF1020 (dnaQ)
03400 DNA repair and recombination proteins [BR:
raf03400
]
RAF_ORF1020 (dnaQ)
Enzymes [BR:
raf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAF_ORF1020 (dnaQ)
DNA replication proteins [BR:
raf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAF_ORF1020 (dnaQ)
DNA repair and recombination proteins [BR:
raf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAF_ORF1020 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACP53844
UniProt:
C3PLK4
LinkDB
All DBs
Position
1043000..1043689
Genome browser
AA seq
229 aa
AA seq
DB search
MSSLREIILDTETTGLDPRQGHRIVEIGAIEMVNKVLTGRNFHFYINPERDMPFEAYRIH
GISGEFLKDKPLFHTIADDFLEFISDSKLIIHNAPFDIKFLNHELSLLKRTDIKLLELAN
TIDTLVMARSIFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVYVELMGGRQSAF
KMVDKSAVINNLATNQVNNKTEQTTIVIKPTKEELQKHKEFLSRILKTA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttaagagaaataattttagataccgagactacgggacttgacccacgacaa
ggtcatcgaatcgttgagatcggtgctattgagatggtaaataaggtattaacaggcagg
aattttcatttttatattaatcctgagcgagatatgccgtttgaggcttatagaattcat
ggcatatccggcgaatttttaaaagacaagcctctatttcatacaatagccgatgatttt
ttagagtttatttcagatagcaaactgattattcataatgctcctttcgatattaaattt
ctaaatcacgaattatcattattaaaaagaaccgacattaaactcttggaactagcaaat
actattgatactttagtaatggctagaagcatatttccaggctcaaaatataatcttgat
gcattatgtaaaagatttaaagttgataattcaggtaggcagcttcacggagctttgaaa
gatgccgcattacttgcagaagtatatgtagagttaatgggcggtagacaatccgctttt
aaaatggttgataaatctgccgtaataaataatttagcaactaatcaagtaaataacaaa
acagagcaaactactattgttattaaacctacaaaagaagagctgcaaaaacataaagag
tttctcagtaggattttaaaaactgcttag
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