Riemerella anatipestifer RA-CH-1: B739_0040
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Entry
B739_0040 CDS
T02331
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B739_0040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rag03019
]
B739_0040
Enzymes [BR:
rag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
B739_0040
Messenger RNA biogenesis [BR:
rag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B739_0040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
FTCD_N
Motif
Other DBs
NCBI-ProteinID:
AFR34649
UniProt:
J9QZ46
LinkDB
All DBs
Position
complement(36908..38338)
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AA seq
476 aa
AA seq
DB search
MKKYINLNQNRNLKLFKTISKVAEERGQTAYIVGGYVRDLLMKRQVPTDIDFVTEQSGIE
LAQAVAKELDSNLKVSVFKTYGTAMIKWKGLELEFVGARKESYSEDSRKPAVEQGSLEDD
QKRRDFTINAMAISLGKEDFGRLVDPFGGVQDLELKTLKTPLEPLQTYSDDPLRMMRAIR
FASTLNFKVEQNSLDAIKQEADRIKIVSMERIMVEFNKIMLSEKPSIGLKLLDDTGLLEK
IIPELTALKGIEEIEGQTHKDNFYHTLEVVDNISKHTDKLWLRWSALLHDIGKAPTKKFV
DGTGWTFHGHEFLGSKMAKPLFQRLKLPLGADLKYVQKMVKLSSRPIALVTDDTSDAALR
RLLFDAGEDLEDLFTLCKADITTKNTKKQERFRKNFEYVAQKIKEVEEKDQIRNFQPPIS
GEEIMALFQLKPGREIGILKEKVKEAILEGEISNTPEEAKDFVIKEAEKIGLQPCI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatatcaatcttaatcagaatagaaatcttaaactgtttaaaactatctct
aaagtagcggaggagagagggcagacggcgtacattgtgggaggttatgtgagggatttg
cttatgaaacgacaagtgcctacggatatagattttgtaacggagcaaagtgggatagag
ttggcacaagcggtggcaaaggagctagattctaatctgaaagtatcggtattcaagacc
tatgggactgctatgataaagtggaaggggctagaattggagtttgtaggtgcgagaaaa
gaaagctactcggaagatagccgaaagcctgctgtggaacaaggaagcctagaagatgac
caaaaacgccgtgattttaccatcaatgcgatggcaatctctttaggaaaagaagacttt
gggcgtttggtggacccttttggtggagtacaggatttagagttaaaaactctgaaaact
ccgctagagcctctgcaaacttattctgatgaccctcttagaatgatgagagcgattagg
tttgcttctacgcttaattttaaggtggaacaaaattctctagatgcgataaagcaggaa
gcggacaggataaagatagtctcaatggagcgtattatggtagagtttaacaaaataatg
ctttccgaaaaaccatctataggcttgaaactcttagacgatacaggacttttggagaag
attatccccgaacttaccgctcttaaaggtatagaagaaatagaaggacaaacgcataaa
gacaatttttaccatacactagaagtagtagataacatctctaaacatacggataaactt
tggttgcgatggtcggcactgttacacgatattgggaaagcacctaccaaaaaatttgta
gatggtactgggtggactttccacggacacgagtttttaggttctaagatggctaaacct
ctttttcagcgattgaagttgcctctaggggcagacctaaagtatgtgcagaaaatggta
aaactttcatctaggcctattgctctggtaacagatgatacttctgatgcggctcttaga
cgtttgttgtttgatgcaggggaagatttggaggatttattcacactatgtaaggctgat
attaccaccaaaaataccaaaaaacaagaacgctttagaaagaactttgagtatgttgct
caaaaaataaaagaggtggaggagaaagaccaaataagaaacttccagccgcctatttct
ggggaggaaattatggctttgtttcaactaaaaccaggtagagaaattgggattttaaag
gagaaagtaaaagaagcaattttagaaggtgaaatttctaacactcccgaagaagctaaa
gatttcgtaataaaagaagctgaaaaaataggattgcagccatgtatttaa
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