Riemerella anatipestifer RA-CH-1: B739_0043
Help
Entry
B739_0043 CDS
T02331
Name
(GenBank) hypothetical protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag00500
Starch and sucrose metabolism
rag01100
Metabolic pathways
rag02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
B739_0043
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B739_0043
Enzymes [BR:
rag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
B739_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_4_9
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
AFR34652
UniProt:
J9R5S3
LinkDB
All DBs
Position
complement(42825..44060)
Genome browser
AA seq
411 aa
AA seq
DB search
MSFLGFSQELVTNGNFESGVTGWSGNAANVVTENGNSYNAANIAIAGNAWDVNLSQVLAL
TAGKVYTLTFDAWSDRDRTLVAGIGLNENPWSAATAVINLTSTSKRYTLTLTAPASSANS
RVIFDMGAAVGFVGIDNVSLVEAVVVPPSAQPLVAAPTPTLPESSVKSVFSDAYTNLSVN
EWGPFWGDASSRINEISIENNPTKVMDVKSGQVFAGIDFSSSLFDATSFTNFYLDYWVAD
PIPAGLVFNVKLSNHNGGAGETSAVQYTVTPESNKWVRLDIPLDSFVSTDASGKLDRNAI
AQIVITAARANSGEPVAIYLDNILFYNKNLSTNEVSVSNVVKLYPNPVSQGESVYVDTEF
EKIEVFTLSGQLAKTLEKGKSFSTNGLIKGVYLVKLTAKNGVIKTSKLMVK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttttaggcttctcacaagaattagtaactaatggaaattttgaatcaggagtt
acaggatggtctggaaatgcagctaatgtagttacagagaatggtaacagctataatgca
gctaatatagctatagctggtaatgcttgggacgttaatttgagtcaagtactagcgctt
acagcaggtaaggtttatactttaacgtttgatgcgtggtctgatagagatagaacttta
gtggcagggataggattgaatgaaaatccttggagtgcagcaacagcagttattaacctt
acatctacttcaaaaagatatactttaacacttacagctcctgcttcgtctgctaatagt
agagttatttttgatatgggagcagcagtgggatttgtaggtatagataatgtttctttg
gtagaagcagttgtagtacccccttcagcacagcctttagtagcagcaccaacgcctact
cttcctgagtctagtgtaaagtcagtatttagtgatgcatataccaacttatccgttaat
gagtggggaccgttttggggagacgcatcaagtagaataaatgaaatatctatagagaat
aacccaactaaagtaatggatgtaaagtcaggacaagtatttgcggggatagatttttca
tcatcattatttgatgcaacgagctttactaatttttatttagactattgggtagctgat
cctataccagcgggattagttttcaatgttaagttatctaatcataacggtggggcaggt
gaaactagtgcagtacaatatacagttacaccagaaagtaataaatgggttagattagac
ataccattagattcatttgtatctacagatgcttcaggaaaattggatagaaatgctatc
gcacaaattgtaattacagctgctagagcaaattcaggggagccagtagctatttattta
gataatattcttttttataataaaaatctaagtactaatgaagtttctgtttctaatgta
gtaaaactataccctaatcctgtgtcacaaggggagtctgtatatgtagatacagaattt
gaaaaaatagaggtgtttacgttaagtgggcagctagctaaaactttagaaaaaggtaaa
tcttttagtacaaatggtttaataaaaggagtttatttagttaaattaactgccaaaaac
ggagttataaaaacttctaaacttatggtaaaataa
DBGET
integrated database retrieval system
