KEGG   Riemerella anatipestifer RA-CH-1: B739_0202
Entry
B739_0202         CDS       T02331                                 
Name
(GenBank) Pyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rag  Riemerella anatipestifer RA-CH-1
Pathway
rag00740  Riboflavin metabolism
rag01100  Metabolic pathways
rag01110  Biosynthesis of secondary metabolites
rag01240  Biosynthesis of cofactors
rag02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rag00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    B739_0202
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B739_0202
Enzymes [BR:rag01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     B739_0202
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     B739_0202
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3 APOBEC_N
Other DBs
NCBI-ProteinID: AFR34810
UniProt: J9QXC3
LinkDB
Position
complement(213213..214232)
AA seq 339 aa
MSYEKYMSRCIALAEKARGNTYPNPLVGAVIVHNGIIIGEGYHHKAGEPHAEINAINSVE
NKGLLKESTIYVSLEPCSHFGRTPPCAAKLTEIGFKKVVIGSVDSNEKVSGKGKAMIEEA
GIEVVDKVLEEQCRWLNRRFFNFHEKKRPYIILKWAESNDGFIDRNFAPTPISNTLASQY
VHKMRAEEHAILVGTQTALNDNPTLDVRHLDGRNPIRVLIDLELKVPRSFNIFNTNAPTI
IFNLHKNCEQDHLKWIKIDRENFLEELMCHLYEQQIQSIIIEGGSKMLNTFIEAQLWDEA
VVIKAPNLTLNNGTKAPIFNEKPYRQKQMRDNVLNFYKK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgtcttacgaaaaatatatgagtagatgtattgctttggcagagaaggctagaggtaac
acttaccctaatcctttggtgggagcggtaattgtacacaatggcatcatcataggggaa
ggctatcatcacaaggcaggagagcctcatgcagaaattaacgctatcaattcggtggag
aacaaagggcttttaaaagaatcaacaatttatgtttcattagagccttgttcccatttt
gggagaacgccaccttgtgctgctaaactcacagaaattggtttcaaaaaagtggttata
ggctccgttgactctaatgaaaaagtaagtggtaaaggtaaagcaatgatagaagaagca
ggaatagaagtggttgataaagtgttggaggaacaatgccgatggcttaacagaaggttt
tttaatttccacgagaaaaaaagaccatacattatactgaaatgggcagagtctaacgat
ggttttatagaccgaaatttcgctccaacgcctatatctaacactttggcatctcaatat
gtgcataagatgagagccgaagaacacgctattttggttgggacacaaacggcacttaat
gataacccaactttagatgtaaggcatcttgacggtagaaatcctatcagagttttaata
gatttagagcttaaagtgcctcgaagttttaatattttcaatactaatgctcctacgatt
atttttaaccttcataaaaactgtgagcaagaccatttgaaatggataaaaattgataga
gaaaattttctagaagaactgatgtgtcatttgtatgaacagcagatacaatctatcatt
atagaaggcggaagcaagatgttaaatacctttattgaagctcaactttgggatgaagcg
gtggtaattaaagctcctaatttaactttgaacaatgggactaaagctcctatattcaat
gaaaaaccttaccgacaaaaacagatgagagataatgttttaaatttttataaaaaataa

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