Riemerella anatipestifer RA-CH-1: B739_0314
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Entry
B739_0314 CDS
T02331
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rag
Riemerella anatipestifer RA-CH-1
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rag03032
]
B739_0314
03036 Chromosome and associated proteins [BR:
rag03036
]
B739_0314
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_0314
DNA replication proteins [BR:
rag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B739_0314
Chromosome and associated proteins [BR:
rag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B739_0314
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B739_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF7354
HU-CCDC81_euk_2
COMMD9_HN
SAP30_Sin3_bdg
A_thal_3526
Motif
Other DBs
NCBI-ProteinID:
AFR34920
UniProt:
J9QXH1
LinkDB
All DBs
Position
complement(338925..339302)
Genome browser
AA seq
125 aa
AA seq
DB search
MFRKSGFCLFVFKNKLYICTPKIKTKKEMTKAELVNTISNKLGIEKNDTQKVIEAFMQEI
RGSLYEGNNVYLRGFGSFIIKTRAAKTGRNISKNTAIEIPAHNIPAFKPSKSFAERVKTK
VPVKD
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaaatcagggttttgtttgtttgttttcaaaaataagttatatatttgcaca
ccaaaaataaaaacaaaaaaggaaatgacaaaagcagaattggtaaataccatatcaaac
aagttgggtattgagaagaatgatacgcagaaagtaatagaggcttttatgcaggagata
agaggttctctttatgaaggtaacaatgtttacttaagaggttttggctctttcattatt
aagactcgtgctgctaaaacaggaagaaatatctctaaaaatacagctatagaaattcct
gcacataacattccagcgtttaaaccatctaaatcttttgcagaaagagtaaaaactaaa
gttccagtaaaggattaa
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