Riemerella anatipestifer RA-CH-1: B739_0503
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Entry
B739_0503 CDS
T02331
Name
(GenBank) Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain protein
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag00020
Citrate cycle (TCA cycle)
rag00620
Pyruvate metabolism
rag00720
Other carbon fixation pathways
rag01100
Metabolic pathways
rag01110
Biosynthesis of secondary metabolites
rag01120
Microbial metabolism in diverse environments
rag01200
Carbon metabolism
Module
rag_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rag_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B739_0503
00620 Pyruvate metabolism
B739_0503
09102 Energy metabolism
00720 Other carbon fixation pathways
B739_0503
Enzymes [BR:
rag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
B739_0503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
Colipase_C
Motif
Other DBs
NCBI-ProteinID:
AFR35107
UniProt:
J9R5R5
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All DBs
Position
533918..535525
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AA seq
535 aa
AA seq
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MEFHYQEPFPILKDDTPYKKLTSEYVKVEKLGDREILTVDPKGLELLAENALADVSFMLR
PTHLQKLKNIIDDPEATDNDRFVAYNLLQNAAVAVEGALPSCQDTGTAICVAKKGEDVYT
GVNDAEWISKGIYNTYQSKNLRYSQIVPLTMFEEKNSGSNLPAQIDIYANKGCEYHFLFL
AKGGGSANKTFLYQKTKSLLNEKNLEAFVKEKIMDLGTAACPPYHLALVIGGTSAEANLA
AVKKASAGYYDNLPTEGNMGGQAFRDLEWEKKVQEICQKSAIGAQFGGKYLTHNVRVIRL
PRHAASCPVGMGVSCSADRNIKGKITKDGIFLEQLEENPKKFLPETPPHLEAPVEIDLNR
PMNEILAELSKYPIKTRLKLKGTLIVARDIAHAKIKELLDSGQPMPEYFKNHPIYYAGPA
KTPEGMPSGSFGPTTAGRMDPYVDEFQKHGGSMIMLAKGNRSKEVTDACAKYGGFYLGSI
GGPAAILAKENIKSVEVVDFPELGMEAVRKIEIEDFPAFIITDDKGNDFFSSIAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcattaccaagaacctttccctattctaaaagacgacacgccttataaaaaa
cttacttccgagtatgtaaaagtggagaaattaggagatagagaaattttaaccgtagac
cctaaaggactagaacttttagcagaaaatgctttagcagatgtttcttttatgctacgc
cctacccatttacaaaaattaaaaaacattattgatgacccagaagctaccgataacgac
cgctttgtagcgtacaatctccttcaaaatgcggctgttgccgtggaaggtgcattacca
tcttgccaagatacaggtacagcaatatgcgttgcaaaaaagggagaagatgtttatact
ggcgtaaatgacgctgaatggataagcaaaggaatttacaacacctatcaatctaaaaat
ttaagatattctcagattgtacctctaacaatgttcgaggagaaaaattctggttctaac
cttcctgcacagatagatatttatgccaacaagggctgcgaatatcatttcttattctta
gcaaaaggaggaggttctgccaacaagactttcctttatcaaaaaactaaatcgctactt
aatgagaaaaatttagaggcttttgtaaaggaaaaaattatggatttgggaacagctgct
tgtccgccgtaccatttagctcttgttattggtggaacttcagcagaagccaacttagct
gctgtaaagaaagctagtgcgggttattatgacaatctcccaacagaaggcaatatgggt
ggacaagcctttagagatttagaatgggaaaagaaagtacaagaaatttgtcaaaaaagt
gctattggagctcaatttggtggaaaataccttacacataatgtaagagtaatccgttta
cctcgccacgcagcaagttgccctgtaggcatgggtgtatcttgttctgcagaccgaaac
ataaaaggaaaaatcactaaagatggtatctttttggaacaattggaagaaaatccaaaa
aaattcttaccagaaacaccacctcatctagaagctccagtagaaattgaccttaaccgt
ccaatgaacgaaatcctagctgagctttctaaatatcctatcaaaacgaggttaaaactt
aaaggtactctcattgttgctagagatatagcacatgctaaaataaaagaacttttagat
tcaggtcagccaatgcctgagtactttaaaaatcatcctatctactacgctggaccagct
aaaactccagaaggaatgccatcaggaagtttcggaccaacaaccgcaggaagaatggac
ccttatgtggacgaattccaaaaacatggcggaagtatgattatgctggctaaaggtaac
agaagtaaagaggtaaccgatgcttgtgctaaatacggcgggttctatctaggctctatt
ggtggtcctgctgcaatacttgccaaagagaatattaaatctgtggaagtggtagatttc
cctgagttaggtatggaagctgtgagaaaaatagaaatagaagacttccctgcatttatc
attaccgatgataagggtaacgattttttctcaagcattgcacactaa
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