KEGG   Riemerella anatipestifer RA-CH-1: B739_1214
Entry
B739_1214         CDS       T02331                                 
Name
(GenBank) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-related enzyme
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rag  Riemerella anatipestifer RA-CH-1
Pathway
rag00010  Glycolysis / Gluconeogenesis
rag00020  Citrate cycle (TCA cycle)
rag00260  Glycine, serine and threonine metabolism
rag00280  Valine, leucine and isoleucine degradation
rag00310  Lysine degradation
rag00380  Tryptophan metabolism
rag00620  Pyruvate metabolism
rag00630  Glyoxylate and dicarboxylate metabolism
rag00640  Propanoate metabolism
rag00670  One carbon pool by folate
rag00785  Lipoic acid metabolism
rag01100  Metabolic pathways
rag01110  Biosynthesis of secondary metabolites
rag01120  Microbial metabolism in diverse environments
rag01200  Carbon metabolism
rag01210  2-Oxocarboxylic acid metabolism
rag01240  Biosynthesis of cofactors
Module
rag_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rag_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rag_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rag_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rag00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    B739_1214
   00020 Citrate cycle (TCA cycle)
    B739_1214
   00620 Pyruvate metabolism
    B739_1214
   00630 Glyoxylate and dicarboxylate metabolism
    B739_1214
   00640 Propanoate metabolism
    B739_1214
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    B739_1214
   00280 Valine, leucine and isoleucine degradation
    B739_1214
   00310 Lysine degradation
    B739_1214
   00380 Tryptophan metabolism
    B739_1214
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    B739_1214
   00670 One carbon pool by folate
    B739_1214
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rag04147]
    B739_1214
Enzymes [BR:rag01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     B739_1214
Exosome [BR:rag04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   B739_1214
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored DAO HI0933_like FAD_binding_3 NAD_binding_8 GIDA Lys_Orn_oxgnase 3HCDH_N Thi4 2-Hacid_dh_C UDPG_MGDP_dh_N AlaDh_PNT_C FLgD_tudor Amino_oxidase DUF5800 DUF6930
Other DBs
NCBI-ProteinID: AFR35812
UniProt: J9R7V6
LinkDB
Position
1306115..1307500
AA seq 461 aa
MNYDIIVIGSGPGGYVTAIRAAQLGFKTAIVEKENLGGICLNWGCIPTKALLKSAQVFKY
INHAEDFGLNKVEASFEFPNVIQRSRGVASKMSKGIEFLMKKNKIDVIFGTAKVQKGKKV
LVEKDGATKEYSAEHIILATGARSRELPNLPQDGKKVIGYRQALSLPEQPKSMIVVGSGA
IGVEFAYFYATMGTKVTIVEFMPNIVPVEDEEVSKHLEKSLKKAGIEVMTSASVESVDTS
GNGVKANVKTAKGNVTLEADVVLSAVGITANIENIGLEEVGIKTDKGRVLVNEWYQTSVP
GYYAIGDIIPTQALAHVASAEGITCVEKIKGLHTETIDYGNIPGCTYCLPEIASVGLTEK
QAKEKGYDIKVGKFPFSASGKATANGDTDGFVKVIFDAKYGEWLGCHMIGTGVTEMIAEA
VVARKLETTGHEILKSVHPHPTLSEAVMEAVAAAYGEVIHI
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaattacgatattatagttataggaagtggtcctggtggttatgtaacagccattaga
gcagcacaattaggtttcaaaacagctattgtagaaaaggaaaacttaggaggtatctgc
cttaactgggggtgtattcctacaaaggcattattgaaatctgcacaagtgtttaagtac
atcaaccatgcagaagatttcggtcttaataaagtagaagctagttttgaatttcctaat
gtaattcagagaagccgtggggtggcgagtaagatgagcaaaggaatagagttccttatg
aaaaagaataagatagatgttatattcggtactgctaaagttcaaaaaggtaaaaaagtt
ttagtggaaaaagatggtgctacaaaagaatattctgctgagcacatcatcttagcaaca
ggagctcgttctagagagctaccaaaccttcctcaagacggcaaaaaagtaatagggtat
agacaagccctttctttaccagagcagcctaaatctatgatagtagtaggttctggagct
atcggagtagagtttgcttatttctacgctactatggggactaaagtaactatcgtggag
tttatgccaaacatcgtacctgtagaggacgaggaggtttctaaacatttagagaaatct
cttaagaaagcaggtatagaggtaatgactagtgcttccgtagaatctgtggatacttct
ggtaacggcgttaaagctaatgtaaaaacagctaaaggtaatgtaacgttagaggctgat
gtggtactttcagcagtaggtattacggctaatattgaaaacataggactagaagaagtt
ggaattaaaacagataaaggtagagttttagtaaatgaatggtaccaaacttcagtacca
ggttattatgcgataggagatattattcctactcaagctttagctcatgtggcttctgcg
gaaggaattacttgtgtggaaaaaatcaaagggctacatacagaaactatagactatggc
aatattccagggtgtacttattgccttcctgaaatagcttcagtaggtcttaccgaaaaa
caagccaaagaaaaaggctatgatattaaggttgggaaattcccattctcagcgagtgga
aaagcgactgcaaacggagatacagatggttttgtgaaagtaatttttgatgctaaatat
ggtgagtggttaggttgtcatatgataggtactggtgttaccgaaatgatagcagaggca
gtagttgctagaaaattagaaactacaggacacgagattttgaaatctgttcacccacac
cctacattgtcagaagcagttatggaagcggtagctgcggcttatggggaggtaatacat
atttaa

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