KEGG   Riemerella anatipestifer RA-CH-1: B739_1426
Entry
B739_1426         CDS       T02331                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rag  Riemerella anatipestifer RA-CH-1
Pathway
rag03030  DNA replication
rag03430  Mismatch repair
rag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B739_1426
   03430 Mismatch repair
    B739_1426
   03440 Homologous recombination
    B739_1426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rag03032]
    B739_1426
   03400 DNA repair and recombination proteins [BR:rag03400]
    B739_1426
Enzymes [BR:rag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B739_1426
DNA replication proteins [BR:rag03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B739_1426
DNA repair and recombination proteins [BR:rag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B739_1426
SSDB
Motif
Pfam: RNase_T ExoX-like_C
Other DBs
NCBI-ProteinID: AFR36024
UniProt: J9R2G6
LinkDB
Position
complement(1511481..1512206)
AA seq 241 aa
METTGTNISKDRIVEICILKVNPDASRETKTWLVNPEMHIPAFATAVHGISDEDVKDAPT
LKEIAPKIMEMISGADLGGFNSNRFDVPLLAEEMLRAGVDFDLSKMKLVDAQVIFHKMEP
RNLSAAYQFYCNKTLEDAHSAEADTLATFEVLDAQVGKYEELPKDINGLSEFSYHQKFAD
LAGFIAFDDKGQEIFTFGKYKGQPVEEVLAKDAGYFGWVQNADFPLYTKKVLTSIQLRRK
F
NT seq 726 nt   +upstreamnt  +downstreamnt
ttggaaaccacaggtaccaatatttctaaagaccgaattgtagaaatttgtatcttaaaa
gtaaatccagacgcttctagagaaaccaaaacttggcttgtgaacccagaaatgcacatt
ccggcgtttgcaactgcagtgcacggaatttccgacgaagatgtaaaggacgctcccacc
cttaaagaaattgcgccaaaaattatggaaatgatttcaggagcagacttaggcggattt
aactctaaccgatttgatgtcccacttcttgccgaagaaatgctaagagcaggcgtagat
tttgaccttagtaaaatgaaactcgtggacgcccaagtgattttccataaaatggaacct
agaaatttaagtgccgcttatcagttctactgcaacaaaaccctagaagacgctcattct
gcagaggcagacactctcgctacttttgaagtactagatgcccaagtaggcaaatatgag
gagctacctaaagacatcaatggtctaagcgagttttcttaccatcagaaatttgcagac
ttagcaggttttattgcctttgatgataaaggacaagagattttcacctttggtaaatat
aaaggacaaccggtagaagaggttttagccaaagatgcaggttatttcggttgggtacaa
aatgctgacttcccgctctacaccaagaaagtacttaccagcatacagctaagacgaaaa
ttttaa

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