Riemerella anatipestifer RA-CH-1: B739_1532
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Entry
B739_1532 CDS
T02331
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag00900
Terpenoid backbone biosynthesis
rag01100
Metabolic pathways
rag01110
Biosynthesis of secondary metabolites
Module
rag_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
B739_1532
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rag01006
]
B739_1532
Enzymes [BR:
rag01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
B739_1532
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
B739_1532
2.5.1.29 geranylgeranyl diphosphate synthase
B739_1532
Prenyltransferases [BR:
rag01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
B739_1532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AFR36124
UniProt:
J9R2Q8
LinkDB
All DBs
Position
1612243..1613214
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AA seq
323 aa
AA seq
DB search
MKFLDRYQDLVAEAIEKHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGSLEK
AMKPALAIEFFHNFTLIHDDIMDDAPLRRNKPTIHTLHGINVGILSGDALLIKAYQFFED
LEPELFKKCITLFSETGAVLCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASFKIG
AMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKKTVLYLL
AMENATEEERKELNYWYSKKTDNIDKIYCVEKIFRRTKVDEKVLRLIQKHNQIGQDCLKT
INLPEDKKQPFIELANYLLKRES
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttagacagataccaagacctagtagcagaagcaatagaaaagcatcaattt
aaaaacgagccaaaagaactctatgagcctatgaactatatcatttctcacggaggaaaa
cgcttgagacctattatggtactgatggggtgcgaactttttggaggtagtttagaaaag
gcaatgaaaccagctttggctatagagttttttcataattttacgcttatccacgacgat
attatggacgatgccccacttagaagaaataaacctacaatacatacgctacacggcatc
aatgtaggtattctgtcgggagatgcattgctcattaaagcctatcagttttttgaagat
ttagagccagaactatttaaaaagtgtatcactttattttccgaaacgggagcagtgctt
tgcgagggacagcagatggacgttaattttgaaaccaattccaatgttacctatgaagat
tatataaaaatgataacctataaaacgggggtgcttagtgcagcttcgtttaagataggg
gctatgatagcgggagctaccgagcaggaggcagaggcattgtatcaatttggtaaacat
attgggattgcgttccagattatggacgattatttagatgtctttggaaatcaggagcag
tttggaaagaaacacgcaggtgatatttttgaaaataaaaagacagtactttacctatta
gcaatggaaaacgcgactgaggaagagcgaaaagagcttaactattggtactctaaaaag
acggataatatagacaaaatctactgtgtagagaagatttttagaagaacaaaagtagat
gaaaaagtattgagattgatacaaaagcacaaccaaatcggtcaagattgtttaaaaacc
attaatctaccagaagataaaaaacaaccttttatagagttggctaattaccttttgaaa
agagaatcttaa
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