Riemerella anatipestifer RA-CH-1: B739_1548
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Entry
B739_1548 CDS
T02331
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B739_1548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1548
Enzymes [BR:
rag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B739_1548
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B739_1548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND3
Cas3-like_C_2
AAA_19
AAA_7
zf-MYND
SIR2
NPHP3_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AFR36140
UniProt:
J9QZP3
LinkDB
All DBs
Position
complement(1627639..1630086)
Genome browser
AA seq
815 aa
AA seq
DB search
MLYAQVILPLNLKGTFTYKVPIDLQDKIALGMRVLVPFRGKKIYTGIISDLHQNTPEEFS
PKEIYSILDDTPILPLPQLEFWQWLSSYYLCNLGEIYRLAFPSSLKLESETYLKLKPNAN
IDYELLDANEILLIQALEVQQLVNLSEMEAFIPKKNLIKTINALIDMHYIEIDEKVAEKY
KVKEVAYVKIKEELLGNQSLAEVISSLNRAEKQKELFLLILSKQTTSPEVPIKKSILFEE
GNFAHAQMKALIDKDLVDEYYLQHDRLETYNGDIEDLEPLTETQNNTFKAIEQSFAQNQK
VLLHGVTSSGKTHIYIHLIEQLIKENKNTLLLLPEIALTKQIIRRLEKKYGDLIGFYHQK
LTDFERVEVWRKVKLNKIKVLIGTRNALFLPYQNLDLVIVDEEHDSAYKPREASPYFNAK
DAAQILAHHYKAHLLLGSATPSLESYYAAQKGKLKYLYLGERYGNVDLPDFEIINIKEEQ
ETKTINGNFSAALIQKIQENLEKNKQIIILHNRRGYANVVECEACGYVTYCSNCDVVMTY
HKSSNEMKCHYCGQRASKPNQCPRCQSQQLNTKGVGVEQVAEEVKRLFPEAEVDRMDIDS
MRKKFAYEKLYEKIENRETNIIVGTQMISKGLDFDHIDLVAIPKADALLYVQDFRAEEKA
YQLITQVSGRAGRTSGKGKIIIQTYNPTHPLFSLIKHNSTQEIYEHFLNDRKKFLYPPFT
KVVLLEIKHSKEGKADRASQFLGSILRKYLPLDCVLGPEKAPIAKLKNKYQFQILLKLPR
NNKYFTFKEYISQSLDEFREISAYQSVKIELFVDF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctttacgctcaagtcatactaccacttaatttaaaaggaactttcacttacaaagtt
cccattgatttacaggataaaatagcgttgggtatgcgcgttcttgttccgtttagagga
aagaagatctatactggaattatctcagaccttcaccaaaacactcccgaagagttttct
ccaaaagaaatttacagcattttagacgacacccctattttacctctcccacagcttgag
ttttggcaatggctatcttcttactatctgtgtaatttaggcgaaatttaccgtttagca
tttccttcatcattaaaattggagagtgagacttatctaaaactcaaaccaaatgctaac
atagattatgaacttctagatgccaacgaaatacttttaatacaagcgttggaagtccaa
caattggtcaatctttctgaaatggaagcctttattccgaagaaaaatttaattaaaacc
atcaacgctcttatagatatgcactatatagagatagatgaaaaagtggcagaaaagtac
aaagtaaaggaggtagcttatgtaaaaattaaagaggaattgctaggcaatcagtcttta
gcagaggttatttctagccttaatagagcggaaaaacaaaaagaacttttcctgctcatt
ttgtctaaacaaacgacttcgcctgaagttcctattaaaaaatctattttgtttgaggaa
ggtaatttcgctcacgcccaaatgaaagctctgatagataaagatctagtagatgaatat
tacctccagcacgaccgactagagacttacaatggtgatatagaagaccttgaacctctt
actgaaactcaaaacaacacatttaaagcaatagaacagtcttttgctcaaaatcagaaa
gtattattacacggcgtaacttcttcagggaaaacccacatctatatccacttgatagag
caactcatcaaagagaataaaaacacattattattactaccagaaattgcattaaccaag
caaattatccgtaggctagaaaagaaatatggcgatttaattggcttttatcatcaaaaa
ctcaccgattttgaacgagtggaagtttggcgaaaagtaaaactcaacaagattaaagtc
cttattggaactagaaacgcattgtttctgccctaccaaaatttagatttagtaattgta
gatgaagaacacgattctgcctacaaacctagagaagctagcccttactttaatgctaaa
gatgcagctcaaatcctagctcatcattataaagcacatctactgctcggctctgccacg
ccatctttagaatcttattacgctgcacaaaaaggaaaacttaagtacctttatttaggc
gaacgatacggcaatgtagatttaccagattttgaaatcatcaatattaaagaagaacaa
gagactaaaactataaatgggaatttttcggcagcgttaattcaaaaaattcaggaaaat
ttagagaagaacaaacaaattattatcctccataacagaagaggctatgccaatgtagta
gaatgtgaggcttgtggatacgtaacctattgctctaactgtgatgtggtaatgacctat
cacaaatcttctaacgaaatgaagtgccattattgcggacaaagagcttctaaacccaac
caatgtcctaggtgccagtctcaacaactcaataccaaaggggttggtgtagaacaagtg
gcggaggaagtcaaaagattgtttccagaggcagaagtggacagaatggacatagactct
atgagaaaaaaattcgcctatgaaaaactctacgaaaaaatagaaaacagagaaaccaac
atcattgttggcacacagatgatttctaaaggtttagactttgaccatatagacctagtg
gcaattcccaaggctgatgcactcctatatgtacaagatttccgagcggaagaaaaagcc
taccagctcatcactcaagtatctgggagagcagggagaacttcaggaaaaggtaagatt
attatacaaacttacaacccaacacaccctttgtttagcttgattaagcacaatagcact
caagaaatctatgagcattttctaaatgatagaaaaaaattcctctatccaccatttacc
aaagtagtacttttagaaattaaacattccaaagaaggcaaggcagatagagcttcacaa
tttttaggttctatccttaggaaataccttcctttagactgtgttttaggtccagaaaag
gctcctatcgcaaagctgaaaaacaaatatcagttccaaatattactcaaactgcctaga
aataataaatacttcactttcaaagagtacatttcacaatcattggacgagttcagagaa
atctccgcttatcaatctgtgaaaatagagttatttgtagatttttaa
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