Riemerella anatipestifer RA-CH-1: B739_1647
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Entry
B739_1647 CDS
T02331
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03030
DNA replication
rag03430
Mismatch repair
rag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B739_1647
03430 Mismatch repair
B739_1647
03440 Homologous recombination
B739_1647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rag03032
]
B739_1647
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1647
Enzymes [BR:
rag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B739_1647
DNA replication proteins [BR:
rag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B739_1647
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B739_1647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
TSGA13
Motif
Other DBs
NCBI-ProteinID:
AFR36239
UniProt:
J9R327
LinkDB
All DBs
Position
complement(1740542..1741549)
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AA seq
335 aa
AA seq
DB search
MISDKWPYSRFPHHFGGVFVFSLSLPRGKNKLFMNFISIDFETANTHRYSPCSLGLCIVK
DSYIIDRKEWLIQPPRNHYNPRNIEIHGITPEMTANQPEFHELWQEIKPYIHNQTILAHN
GNNIDKNILLKTLEYYDIPYSEDDFLIVDTLQLSKRLFHNLKSYTLKDICDFLSIPFDET
HYHNSLYDATKTAELGIKLNEYFALLPDFSIDYNFSKTKSKAKPTKNILLSDIIANKEVR
SISSELINPKTDIEDTSHFFYSKKVVITGTFERFPLRDELAKLLYDVGADINRGISSKTD
YVIVGANAGWKKLEQIEKLGIEIIDENKFIELFNL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttgatttcagataaatggccatatagccgtttcccccaccattttggtggggtttttgtt
ttttctttatctttaccacgaggaaaaaataaattgtttatgaactttatttctattgac
tttgagactgctaatactcatcgctacagtccgtgttctctaggattatgcattgtaaaa
gactcttatatcattgacagaaaggaatggttaatacaacctccaagaaaccattataac
cctcggaatattgaaatacacggaataacgccagaaatgacagctaaccaaccagaattt
catgagctttggcaagagattaaaccatacattcacaaccaaacaatattagctcataat
gggaataatattgataagaatatacttctaaaaacgctagagtattacgatattccatat
tctgaagacgactttttgatagtagataccttacaactctccaagcgattattccacaat
ttgaaaagctacacactaaaagacatttgcgattttctttctattccttttgatgaaaca
cactatcataattctctatatgatgccacaaaaactgctgagttaggaataaagctaaac
gaatattttgcgttattgcctgatttttctattgattataatttttctaaaacaaaaagc
aaagctaagcctacaaaaaatatactcctttctgatattattgcaaataaggaagtaagg
tccatttcatcagaattgataaacccaaaaactgatatagaagacacctcccatttcttc
tactctaaaaaagtagtgattacaggaacttttgaaaggtttccacttagagatgagctg
gcgaaattgctttatgatgtaggagcagatatcaatcgtggtatttctagcaagacagat
tatgtcattgttggtgcaaatgcaggatggaaaaaacttgaacaaatagaaaaattaggt
attgaaatcattgatgaaaataaatttatagaactatttaatttgtaa
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