Riemerella anatipestifer RA-CH-1: B739_1760
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Entry
B739_1760 CDS
T02331
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rag03032
]
B739_1760
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1760
Enzymes [BR:
rag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B739_1760
DNA replication proteins [BR:
rag03032
]
Prokaryotic type
DNA Topoisomerases
B739_1760
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B739_1760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFR36344
UniProt:
J9R3A9
LinkDB
All DBs
Position
1839977..1842502
Genome browser
AA seq
841 aa
AA seq
DB search
MHKEGERLIPINIVDEMKSSYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYGLGVFSN
KKYLKSARIVGDVLGKYHPHGDRSVYDAMVRMAQPWSLRYPQVDGQGNFGSMDGDPPAAM
RYTEARLKKISDEILSDLDKETVDFQNNFDDSLQEPTVLPTKIPNLLVNGTSGIAVGMAT
NMAPHNLSESVDAICAYIDNKEIEIDELMKYIIAPDFPTGGIIYGYDGVRDAFHTGRGRI
VLRAKVAFEEIGNRNAIIVTEIPYLVNKAEMIARTSELVKEDKIQGIHEIRDESDRRGMR
VVYELKNDAIPNVVLNLLYKYTALQTSFSVNNIALVKGRPQQLNLKDIIVHFVEHRHEIV
IRRTQYELKKARERAHILEGFMKVIATQDTLDKAISIIRHSATPQAAKEGLIAEFELSDI
QAQAILDLRLARLTGMELDKIRDEYKAIMDLINDLEDILANEARRYQIIKDELLEVKEKY
GDERRTEIDYSGGEMSIEDFIPNEEVVLTISHAGYIKRTLLSEYKTQSRGGVGNRAASTR
DEDFLEYIVSATNHQYMLFFTEKGKCYWLRVFEIPEGSKTAKGRAIQNLINIEPDDKIKA
YIRTNDLKDSEYVKQMYVVMITKNGTIKKTSLEAYSRPRTNGIHAIEIREDDQLLGARLT
NGNSEIMIATKNGKCIRFPEEKARAVGRTSIGVRGISLEDNDEVIGMIVVNDIENETVLV
VSEKGYGKRTAVEDYRVTNRGGKGVITLNITEKTGQLIAIQSVVDGNDLMIINKSGVAIR
MSVDNMRVMGRNTQGVRLINLKNNDEIAAVAKVEAEKDVEDEEMEESNDETVNPSEGNSE
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagaaggagaaaggttgatacctatcaatattgtggacgaaatgaagtcctct
tatattgactactcaatgtccgttattgtatctcgtgccttgccagatgtaagggacgga
ttaaaacctgtacatcgtagggttttatatggtatgtatggattgggagttttttcaaat
aaaaaatatttaaaatctgccagaattgtaggagatgttttgggtaaataccacccacac
ggtgatagatctgtttatgacgctatggtgcgtatggcacaaccgtggagtttaaggtat
ccgcaagtagatggtcaaggtaactttggttctatggacggtgacccaccagcagctatg
cgttataccgaagccaggctgaaaaaaatatccgatgaaattctatcagacttagataaa
gaaactgttgattttcaaaataacttcgatgatagtttacaggagcctacagtgttgcct
actaaaatacctaaccttttagtaaatggtacttctggtattgcggtaggtatggcaact
aatatggcgcctcataacttatcggaatcggtagatgctatctgtgcctacatagataat
aaggagatagaaatagatgagttaatgaaatacatcatcgctcctgacttccctacggga
ggaattatctacggctatgatggagttagagatgcgttccatacaggaagagggcgaatt
gtattaagagctaaagtcgcttttgaagagattggaaaccgtaatgccattatcgttacc
gaaatcccttatctggtgaacaaagctgaaatgatagctagaacatcagagttggtaaaa
gaggataaaatacaaggtattcacgaaattagagacgagtctgataggagaggtatgcgt
gtggtttacgaacttaaaaacgatgcaatacctaatgtagttcttaacctattgtataaa
tatacggcgttacaaacttcgtttagtgttaataatattgccttagtaaagggtagacca
caacagcttaacttaaaagatattattgttcactttgtggagcatcgtcacgagattgta
attcgtagaacccagtatgagcttaaaaaagcaagagaaagagctcatatcttagaaggt
tttatgaaagttattgcaactcaggatactttagataaggcaatttctatcattaggcat
tcagcaacgccacaagctgctaaagagggattgattgcagagtttgaactttcagatata
caggctcaagccatcttagatttaagattagctaggcttacaggtatggaattagataaa
atccgtgatgagtacaaagctattatggatttaattaacgacttggaagatatccttgct
aatgaagctagacgctaccaaatcattaaagatgaactgttagaagttaaagaaaaatat
ggcgatgaaagaagaacggaaatagattattctggaggtgaaatgtccatagaagacttt
atccctaacgaagaggtggtacttaccatatctcacgcaggatacatcaagagaaccctc
ctttcagaatacaaaactcagagtagaggcggagtgggcaaccgcgcggcatctacaaga
gacgaggatttcttagaatatattgtttctgcaaccaatcaccagtatatgctattcttt
acggaaaaagggaaatgctactggttgagagtatttgaaattcctgaaggttccaaaacg
gcgaaaggtagagcaatacagaacttaatcaatatagaacctgatgataaaatcaaggct
tacattagaaccaatgatttaaaggactctgagtatgttaagcagatgtatgtggtaatg
attaccaaaaacggaacgatcaagaaaacttcgttagaggcttattctagacctagaacc
aacggtatccacgccatagaaattagagaggacgaccagcttctaggagcaagacttacc
aacggtaactccgagataatgatagctactaaaaatggtaaatgtatccgtttcccagaa
gagaaagcaagagcagtgggtagaacttccattggagtaagaggtatttctctagaagac
aacgacgaggtaattggtatgatagttgtaaatgatatagagaatgaaactgttttagta
gtttctgaaaagggctatggtaagagaactgcagtagaggattatcgtgtgactaaccgt
ggaggtaaaggagtgattaccctcaatattaccgaaaaaacgggacaacttattgcgata
caatcagtagtagatggtaacgatttaatgattatcaataaatcaggggttgcaataaga
atgtcggtggacaatatgcgtgttatggggagaaatacccaaggtgtaaggctaattaat
cttaaaaacaatgatgagatagcggccgtagcaaaagtggaggcagagaaagatgtagag
gatgaagaaatggaagaatctaatgatgaaactgtaaatccgtctgaaggaaattcagag
gaatag
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