Riemerella anatipestifer RA-CH-1: B739_1879
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Entry
B739_1879 CDS
T02331
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domain protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03030
DNA replication
rag03410
Base excision repair
rag03420
Nucleotide excision repair
rag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B739_1879
03410 Base excision repair
B739_1879
03420 Nucleotide excision repair
B739_1879
03440 Homologous recombination
B739_1879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rag03032
]
B739_1879
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1879
Enzymes [BR:
rag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B739_1879
DNA replication proteins [BR:
rag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B739_1879
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B739_1879
NER (nucleotide excision repair)
GGR (global genome repair) factors
B739_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
ACS_CODH_B_C
DUF2202
Motif
Other DBs
NCBI-ProteinID:
AFR36463
UniProt:
J9R7I6
LinkDB
All DBs
Position
complement(1960320..1963127)
Genome browser
AA seq
935 aa
AA seq
DB search
MTENTDKKLYLVDAYAMIFRGYYAFIRNPRLTTGGLDTSAIYGFTNSLIELIKKERPTHL
AVVFDVGRQNVRHEDFSDYKANRAETPEAIKIAVPYIHRILKAMHIPILGVEGYEADDVI
GTIASKAEKQGYEVFMVTPDKDFAQLVTEHIKIYKPRLKGGDVEILGVKEVLEKYEIENP
KQIIDYLGMMGDSVDNIPGLEGVGEKTAKKFIKEYGSMENLLANTHQLKGKLREKVEASA
ERGLMSKKLATILCDAPIEFHQEEYDLETPNFEEVKQIFEEIEFRRLYENLYKAFSTENS
AEEKKSDKDSVQSPVQLDLFSDFEALEQATTTKHTIEDREHLYQYIDTEKGQLLLLQNLL
KQKAVCFDTETTSLDEMEAELIGISFSYKKGLAYYVPIPENRAEAQAIVERFRPFFEKES
ILKIAHNLKYDYKVLLNYGIEVTGNLFDTMIAHYLLNPDGRHGMDYLSEMYLNYKPIALE
TLIGKKGKGQKTLREIDLPTQTQYAAEDADITFQLYEIFSPQLRKEEVEEVFYKIEMPLV
KVLAKMELAGVALDKEWLKDESISLEQDLKILEGQIFEQAGEEFNINSPKQLGDILFEKL
KLDPKAKKTKTGQYSTSEDVLQKLSHKHEIIKLILEYRQLQKLKSTYVDALPNQISPIDG
RVHTSFAQTVAATGRLASNNPNLQNIPIRTERGQQVRGAFVASKGAKIVSADYSQIELRL
IAEISGEETMINAFKEGQDIHASTASKLFDVPLSEVSKTQRSQAKTVNFGIIYGQSAFAL
ADQTGLSRTDAKQLIDSYYETYPKLKAFMAEQVQVARKKGYVETIMGRRRHLKDINSNNF
VVRGHAERNAVNAPIQGSAADIIKLAMIKIDSEIKAQGLKTKMLLQVHDELIFEVPNEEI
EVATTLIKQEMETAYSTKVPLLTEVGVGDNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaataccgataaaaaactgtatcttgtagatgcctacgcaatgatttttaga
ggctactatgcctttatcagaaatcctagacttaccactggtggattagacacttccgct
atctatggttttactaactctcttattgagttaattaaaaaggaacgccctacacattta
gcagtcgtttttgatgtgggaaggcaaaatgtaagacacgaagatttttctgactataaa
gccaacagagccgaaactccagaggctataaaaattgcggtgccttacattcatcgtatt
ttaaaggcaatgcatatcccaattttaggagtagagggctacgaggcagatgatgttata
ggtactattgcaagcaaggcagagaagcaaggctacgaggtgtttatggtaacgccagat
aaagattttgcacaactcgttacagagcatataaaaatctataaaccaaggttaaaaggt
ggcgatgttgaaatcttaggagtaaaggaagttttagaaaaatacgaaatagaaaaccct
aagcagattatagattatctaggaatgatgggcgactcggtggataatatccctgggctt
gaaggagtgggagaaaagaccgcaaaaaaattcatcaaggagtatggctcaatggagaat
cttctagccaatactcatcagcttaaagggaaattaagagaaaaggtggaagcctccgca
gagcgtggtctaatgtcaaaaaaactagctaccatactttgtgatgctcccatagaattc
caccaggaggagtacgatttagaaacacctaactttgaagaagtaaaacaaatttttgaa
gagatagaattccgaagattgtacgaaaatctttacaaagccttctctacggaaaattca
gcagaggaaaaaaaatcggataaagattctgttcagtcgccagtacagttagatttattt
tcagattttgaagcattagaacaagctacaactaccaaacataccatagaagaccgagag
catctctatcaatatatagatacagagaaaggtcagcttttgctcctacaaaatctattg
aaacaaaaagcggtttgttttgatacagaaaccacctctttagatgagatggaagcagag
cttataggcattagtttcagttataaaaaaggcttggcttattatgtcccaatccctgaa
aatagagcggaggcacaggctattgtagagcgttttcgtccgttttttgaaaaggaaagt
atcttaaaaattgctcataatctaaaatatgactataaggtactcctaaattacggtata
gaagttacaggtaatttatttgatacaatgattgcccactacttgctcaatcctgatggc
agacacggtatggattacctttcggaaatgtatcttaattataaacccatagcattagaa
actttaattggcaaaaaaggaaaagggcaaaaaacattacgggaaattgacttaccgaca
caaacacaatacgccgcagaagatgctgatattacctttcagttatacgaaattttttcg
cctcaactaagaaaagaagaagtagaagaggtattttataagatagaaatgcctttagtt
aaagtattagctaaaatggaacttgctggtgtagctttggataaagaatggctaaaagat
gaaagtattagcttagagcaagatttaaagattttagaaggacaaatatttgaacaggcg
ggagaagagtttaatattaactctcctaaacagttaggggatatactatttgaaaaatta
aaattagaccctaaagctaagaagacgaaaacaggacagtattccacttcggaagatgtt
ttgcaaaaactttctcataaacacgagattatcaagttaattttggaataccgacaatta
caaaaactaaaatccacttatgtagatgctttgccaaatcaaatcagtccaatagatggc
agagtgcataccagctttgcccagacggtagccgctactgggagattagcaagtaataac
cctaatttacagaatatccctataagaacggaacgaggacaacaggtgagaggtgctttt
gtagcttccaaaggggctaaaattgtttcagccgactattctcaaatagagcttcgtctt
attgcagaaatttcaggggaggaaacaatgataaacgcatttaaggaaggacaagatatt
cacgcttctacggcttccaaattatttgatgttcctttgagtgaagtttctaaaactcaa
agaagccaagctaaaacggttaattttggtattatttatgggcaaagcgctttcgcttta
gcagaccaaacaggtctttctagaactgatgccaaacagcttatagactcctattacgaa
acttatccaaagctaaaagcctttatggcagagcaagttcaagtggctagaaagaaaggt
tatgtggaaactataatgggaagaagaagacatctaaaagatatcaactctaacaatttt
gtagtaagaggacatgccgaaagaaacgctgtaaatgctccgatacaaggtagtgctgct
gatattataaaattggcaatgataaaaatagattctgaaataaaagctcaaggtttaaaa
accaaaatgcttttacaggtacacgatgaattgatatttgaggttcccaatgaagagata
gaggttgcaactactttaataaaacaagaaatggaaactgcttattccactaaagtacca
ttgcttacggaggttggggtaggagataattggctagaagctcattaa
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