Riemerella anatipestifer RA-CH-1: B739_1889
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Entry
B739_1889 CDS
T02331
Name
(GenBank) Monomeric isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag00020
Citrate cycle (TCA cycle)
rag00480
Glutathione metabolism
rag00720
Other carbon fixation pathways
rag01100
Metabolic pathways
rag01110
Biosynthesis of secondary metabolites
rag01120
Microbial metabolism in diverse environments
rag01200
Carbon metabolism
rag01210
2-Oxocarboxylic acid metabolism
rag01230
Biosynthesis of amino acids
rag04146
Peroxisome
Module
rag_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rag_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B739_1889
09102 Energy metabolism
00720 Other carbon fixation pathways
B739_1889
09106 Metabolism of other amino acids
00480 Glutathione metabolism
B739_1889
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B739_1889
Enzymes [BR:
rag01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
B739_1889
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AFR36472
UniProt:
J9R9T1
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All DBs
Position
1977575..1979791
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AA seq
738 aa
AA seq
DB search
MSTAKIYYTLTDEAPMLATHSFLPIVKAFTKSADIQIEVPDISLSGRILANFPEVLTEEQ
RILDALTQLGELATKPEANIIKLPNISASIPQLNEAIEELQKKGFNVPNYPAEPKTEEEK
EIKAKYAKVLGSAVNPVLREGNSDRRAPKAVKNYAKANPHRIGEWKSDSKTDVAHMNQGD
FYGTETSTTVEKDGKFKIVFFGNDGSEKVLKDYASLQAGEIIDSSVMNIKALKTFVKEAI
QEAKSRNVLLSAHLKATMMKVSDPIIFGAIVETFFQEVFEKYAETFKSLDVNPNDGLASL
YDKIAGIAQEADIKADIERVLNESSRVAMVNSDKGITNFHVPSDVIVDASMAALVRGGGK
MWNKDGQEEDTLAIIPDRSYAGFYQAVIDDMKANGKLDPTTMGSVPNVGLMAKKAEEYGS
HDKTFQMEAEGTVKVLNENNEVLLEQKVEAGDIFRMCQTKDAPIQDWVKLAVNRSRLSDT
PAIFWLDKGRAHDREVIKKVEQYLKNYDTQGLDIKILDVKDAMSETLKRAREGKDTISVS
GNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHIEQFIEEGYLRWD
SLGEFLALQASLEHLAQTQNNTKAQVLADALDEANAKFLANDKSPARKIGSIDNRGSHFY
LALYWAEALAAQTQDSELSTLFQPIAKEMQENEAKINEELIASQGKAQDIEGYYRPNEDK
TYAAMRPSVTLNQIIDRI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagctaaaatttactacacccttacagatgaggctcctatgttagccacacat
tcgtttttgcctattgtaaaagcatttacaaaatctgcagatatacagatagaagttcct
gatatttctttgtctggaagaatattagctaactttccagaagttcttaccgaagaacaa
agaatccttgatgctttaactcaattaggagaattagctacaaaaccagaagctaatatt
attaagttacctaatatttcagcttctatacctcagcttaatgaggctatagaggaacta
cagaaaaaaggattcaatgtacctaactatcctgcagaaccaaaaacggaagaagaaaaa
gaaattaaagctaaatatgctaaagtactcggttcagctgtaaaccctgtgcttagagaa
ggtaattctgacagaagagctcctaaggctgttaaaaactatgcaaaagctaatcctcat
agaataggtgaatggaagtctgatagtaaaacagatgtagctcatatgaaccaaggagat
ttctacggtaccgaaacttctacgactgtagagaaagatggtaagtttaaaattgtattc
tttggaaatgacggttcagaaaaagtactaaaagattacgcttctcttcaagcaggagaa
attatagattcatctgtgatgaacatcaaagccttaaagacttttgtaaaagaggcaata
caagaagctaaaagtagaaatgtattgctttctgctcatttaaaggcaactatgatgaag
gtgtctgaccctattattttcggagctattgttgaaacattcttccaagaagtatttgaa
aagtatgcagaaacattcaaatcattagatgttaatcctaacgatggactagcaagtctt
tatgataaaattgcaggaattgctcaagaagctgatataaaagctgatatagagcgtgtt
ctaaacgaaagttctagagtagcaatggtaaactcggataagggaattactaacttccac
gttcctagtgatgttattgtagatgcttctatggcggcattagttcgtggtggcggtaaa
atgtggaataaagatggacaagaggaagatactttagccataatcccagaccgttcttat
gcaggtttctatcaagctgtaatagatgatatgaaagctaatgggaagctagaccctact
actatgggtagtgtacctaatgtggggctaatggctaaaaaggcagaagagtacggttct
cacgataagactttccaaatggaagctgaaggtacagtaaaagttcttaatgaaaacaac
gaggttctattagaacagaaagtagaggctggagatattttcagaatgtgccaaactaaa
gatgctcctatacaagattgggttaaattagcggttaaccgttctcgcttatcggatact
ccagctatattttggttagataaaggtagagctcacgatagagaagttatcaaaaaagta
gaacaatatcttaaaaattacgatacacaagggcttgatattaaaattttagatgttaaa
gacgcaatgtctgaaactcttaaaagagctagagaaggtaaagacactatttctgtatct
ggcaatgttcttagagattatcttacggatttattccctatcctagagttaggaacctcg
gctaagatgttgtctattgtacctcttatgaacggtggtgggctatttgaaacaggtgca
ggaggttctgctcctaaacatatagagcagtttatagaagaaggctatttacgttgggat
tctttaggagaatttttagcattacaggcaagtttagaacacttagcacaaactcaaaat
aatacgaaggctcaagtattggcagatgcactagatgaagctaatgccaagtttttagct
aatgacaaatctccagctagaaaaataggaagcatagataatagaggttctcatttttat
ttagcgttatattgggcagaagctttagcagcacagactcaagattcagagttatctact
ctgtttcaacctattgctaaagaaatgcaagaaaatgaggcaaaaatcaatgaagagctc
atcgcttctcaaggtaaagctcaagatattgaaggctactatcgtccaaacgaagataaa
acttacgctgcaatgcgtccttcggtaacacttaatcaaattattgatagaatataa
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