Riemerella anatipestifer RA-CH-1: B739_1942
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Entry
B739_1942 CDS
T02331
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rag
Riemerella anatipestifer RA-CH-1
Pathway
rag03030
DNA replication
rag03430
Mismatch repair
rag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B739_1942
03430 Mismatch repair
B739_1942
03440 Homologous recombination
B739_1942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rag03032
]
B739_1942
03400 DNA repair and recombination proteins [BR:
rag03400
]
B739_1942
Enzymes [BR:
rag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B739_1942
DNA replication proteins [BR:
rag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B739_1942
DNA repair and recombination proteins [BR:
rag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B739_1942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AFR36524
UniProt:
J9R3S2
LinkDB
All DBs
Position
complement(2042841..2043878)
Genome browser
AA seq
345 aa
AA seq
DB search
MKELEIILKNIKNKELLPIYFFHGEEPYYIDVAVKHFENEVLTEDEKAFNQTVVYGKDTT
YSEVLALARQFPMMGDKQLIVLKEAQDIRLTEKETEALEAYVNNPVPSTILVIAHKHKKV
DSRKKFAKTLAKNKMLFLSEPVKDWNLPQFIQDEISRAGLKAEPNIPTILAEYLGNDLSR
IANEINKLKLILKEGEVLNSLLVEKHIGISKDYNVFELQKALGTKNEEQAMKIAYYIGKN
PKSNPFVMMLGSLYNYFSNLIVFHSLKGMSPQSIAAEMGVNPYFIKDYETSARLYPLKHA
TRIISILREFDMKSKGLGAVNMTDAELLKEMVYKILNVDKTKVKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttagaaataatcctcaaaaatattaaaaataaagaacttctccctatttat
ttttttcatggggaagagccttattatatagatgtagcggtaaaacatttcgaaaatgaa
gtcctcacagaagacgaaaaagcgtttaaccaaaccgtagtttatggtaaggatactact
tattcggaagtattggcattggcaaggcaattcccaatgatgggcgataaacaacttatt
gtactcaaagaagctcaagatattagacttacggaaaaagaaacagaagccctagaagcc
tatgttaataatcctgtgccatctaccattttggtaattgctcacaagcataaaaaagta
gattctagaaaaaagtttgctaaaactttggctaagaataaaatgcttttccttagcgaa
cctgtcaaagattggaatttacctcaatttatacaagatgaaatttctagagcagggctg
aaagcagaacctaatattcccacaattttagctgaatatctagggaatgatctttctaga
atagctaatgaaatcaataaacttaaactgattttaaaggaaggagaggtacttaatagc
cttcttgtagagaaacatattgggattagtaaagattataacgtatttgaattacaaaag
gcattaggaacgaagaatgaagaacaagcgatgaaaatagcttattacatcggtaaaaat
ccaaaatctaatccgtttgtgatgatgttgggtagtttgtataattatttttctaacctc
attgtttttcatagccttaaaggtatgtcgccacagagtatcgcagcggagatgggtgtt
aatccttattttattaaagattacgaaacttcggcgaggctttatccactaaaacacgcc
actagaattatatctattcttagagaatttgatatgaaaagtaaaggtttaggagcagta
aatatgacagatgccgagcttctgaaagaaatggtttataaaattttgaatgtagataaa
acaaaagttaaagtataa
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