Roseibium aggregatum: QUB73_00080
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Entry
QUB73_00080 CDS
T11280
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ragg Roseibium aggregatum
Pathway
ragg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QUB73_00080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ragg02000
]
QUB73_00080
Transporters [BR:
ragg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
QUB73_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
RHH_1
Motif
Other DBs
NCBI-ProteinID:
WJS02709
LinkDB
All DBs
Position
complement(19011..20621)
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AA seq
536 aa
AA seq
DB search
MTKSKDAEMLERLEAAARTGGISKRDFLRYSVLAGLTASTATGLWSTEAKAQPKQGGTFR
WGIHDGNTSDSHDPGTYLTRVMIFLAHTHRSYLTMIMGDGSLGPDLADSWEASEDASEWT
FKITENAEFHSGRKLTADDVIASLNHHRGDKTTSAAKALLTDVTDITKDGDYTVVVKLSG
GNADFPWLMTDYHMAICPANDDGTIDWQSGDGTGPYKIDNGEFGVQFSLSRHDGWHREGA
YFDKVELITLNDPNARQTALVTGDVDAVSLIELKTMGLLQRNPNIKIHNIPSAGAITLPM
FCDTAPFDNPDVRNALKLAMNRDDIIEKITFGAATKGNDFHHSPAQPYWPDDIPQRDYDP
DQAKSLLKKAGAEGLTVSLSTADSVYAGAVDMAVLYAEHAKAAGININVVREPNDGYYSD
VWLKKPFCLVSWGARPTPDVMYTLAYKNDAAWNESHWKNPRFNELLLQAKAELDDTRRAE
MYREMAMLARDDGGTIIPFFNNFVYANSAKVGTPEKLAASWENDGARAASRWWFES
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccaaagatgccgagatgctcgaaaggcttgaagcagcggcccgcacggga
gggatcagtaaacgtgatttccttcgctactccgtgctggccggactgacagcaagcacc
gcaacaggcctgtggtcgaccgaggcgaaagcccagcccaagcagggcgggacgttccgc
tgggggatccacgacggcaacacctcagattctcacgatccgggcacctatctgacccgc
gtgatgattttcctcgcccacacacaccgcagctacctgacgatgatcatgggcgacggg
tcgcttgggccggatctggccgacagctgggaagccagcgaggatgcgtccgaatggacc
ttcaagatcactgaaaacgccgagttccacagcggcaggaaactgacggctgacgatgtc
atcgcatcgctgaaccaccaccgcggcgacaagacaacctccgcagccaaggcgctgctg
acggatgtcaccgacatcaccaaggatggcgactacaccgttgtcgtgaagctgtccggc
ggcaacgccgacttcccatggctgatgaccgactatcacatggcgatctgcccggccaac
gacgacggcacgatcgactggcagtccggcgacggcactggtccctacaagatcgacaac
ggcgagttcggcgtccagttcagcctcagcaggcatgacggctggcaccgtgagggcgcc
tatttcgacaaggtcgagctgatcaccctgaacgatccgaacgctcgtcagacggcactt
gtgaccggcgatgtggatgcggtctcgctgatcgagctgaagaccatgggtctgctgcag
cgcaatccgaacatcaagatccacaacatcccgtccgcgggcgcaatcacgctgccgatg
ttctgtgacacggcaccgttcgacaatccggacgtgcgcaacgcgcttaagctggccatg
aaccgggatgacatcatcgagaagatcaccttcggtgcagccaccaagggcaatgacttc
caccattcgccggcccagccttactggccggacgacatcccgcagcgtgattacgatccg
gaccaggccaagtccctgctcaagaaagcgggcgcagaaggtctcacggtcagcctcagc
accgcggacagcgtctatgcgggtgcagtcgacatggcggtgctttatgccgaacacgcc
aaggcggcgggtatcaacatcaatgtcgtgcgtgaaccgaacgacggttactactccgac
gtctggctgaagaagccgttctgtctcgtgtcctggggcgcgcgtccgacacctgatgtc
atgtacacgctggcctacaagaacgacgcggcctggaacgagtctcactggaaaaacccg
cgcttcaacgagcttctgcttcaggcgaaggccgagctggacgacacccggcgcgcggaa
atgtaccgcgagatggcgatgctggcccgggacgatggcggcaccatcatcccgttcttc
aacaacttcgtttacgccaacagcgcgaaggtaggcacgcccgagaaactggctgccagc
tgggaaaatgacggcgcgcgtgccgccagccgctggtggttcgagtcctga
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