Roseibium aggregatum: QUB73_00485
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Entry
QUB73_00485 CDS
T11280
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ragg03400
]
QUB73_00485
Enzymes [BR:
ragg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QUB73_00485
DNA repair and recombination proteins [BR:
ragg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QUB73_00485
Prokaryotic type
QUB73_00485
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WJS02789
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Position
107357..108925
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AA seq
522 aa
AA seq
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MTKTIQIVWFKKDLRIEDNAALKRASLHGPVLPLYVIEPDLWQQPDMAGRHYAFLLECLA
ELSRDLAAVGQPLVIRTGEVTEVLGAFLRSNGVAGLWSHEETGNDWTFARDKRVAAWCRA
QGIPWTECRQTGVIRRLQTRDGWAAYWDRFMAEAPVDPPCLSPLAESNPGIDLGKPPAAS
ELGLPNDHCPNRQRGGRSPAQSTLHSFLFKRGKPYRAAMATPVKAFDACSRLSPYLAFGS
LSLREVTQATWSRQRDLKHSEFPSRSTWQAAMRSFSGRLHWHCHFMQKLEDEPSLEFRNL
HPAYEGLRPAQPDRERLEAWQKGETGLPFVDACMRALAATGWMNFRMRAMLMAVASYHLW
LDWRAPGLHLARLFTDYEPGIHWPQVQMQSGTTGINTIRIYNPVKQGLDQDPEGLFVRRW
VPELKDIATAHVHEPWKADNADKVLGKCYPFPVVDYLEAAREARDKVWAVRKGQAFRGAA
ADIQSKHGSRKSGIAMRGQEKARRGRKPRINPDQADLFGPNS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaaaccatccagatcgtctggttcaagaaggacctgaggattgaggacaatgca
gcgctcaaacgagcaagccttcacggtccggtactgccgctctacgtcatcgaacccgac
ctgtggcaacagcccgacatggcaggacgccactatgcgtttttgctggaatgccttgcc
gaattgagtcgagacctggcagcggttggccagccgctggtcatccgcacgggcgaggtt
accgaggttctcggtgccttcttgcgatcaaacggagttgccgggctctggtcacatgaa
gagacgggaaacgactggacgtttgcccgggacaagcgtgttgccgcctggtgcagggct
cagggaattccctggacggagtgccggcaaaccggcgtaattcgacgccttcaaacacgg
gatggctgggccgcgtattgggaccgcttcatggcagaagcgcctgtcgatccgccctgc
ttgtcgccacttgccgaaagcaatcccggtatcgatctcggcaagcctccagcagcatcg
gaactgggtttgcccaacgaccattgcccgaaccggcagcgcggcgggcggtcccctgca
cagtcaactctgcacagcttcctgtttaagcgcggcaagccttatcgggcagccatggca
acgccggtcaaggccttcgatgcctgctcccggctttcgccctatctggcattcggttcg
ctgtcgctgcgcgaggtaacccaggcgacctggagccgccagcgcgatctgaagcactcg
gagtttcccagccgcagcacatggcaggcagccatgcggtccttttcgggccgtcttcac
tggcactgccatttcatgcagaagcttgaagacgaaccctctctggagttccgcaacctg
caccccgcctacgagggtcttcgaccggcccagcctgaccgagaacggcttgaagcctgg
cagaaaggggagacgggcctgccctttgtcgatgcctgcatgcgggcactcgcggccacc
ggatggatgaattttcgaatgcgggcaatgctgatggcagttgccagctatcatctgtgg
ctggactggcgagcaccgggcctgcatctggcgcggcttttcaccgattatgaacccggc
attcactggccgcaggtgcagatgcaatcgggaaccaccgggatcaacaccatccggatc
tacaatccggtgaagcagggtctcgatcaggacccggagggtctgttcgttagacggtgg
gtgccggagctgaaggacattgcgaccgcgcatgttcacgaaccctggaaggcagataac
gcagacaaggttctgggcaaatgctatcccttcccggtcgtcgattatctcgaggcggcg
cgcgaggcgcgggacaaggtctgggctgtacggaagggacaagcattccgcggggcagcg
gcagatatccaatcgaaacacggcagccggaaaagcgggattgcaatgcgcggccaggag
aaagcccggcgcggcaggaaaccgcggatcaatcccgaccaggcagaccttttcgggcca
aactcatga
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