Roseibium aggregatum: QUB73_05125
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Entry
QUB73_05125 CDS
T11280
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ragg03000
]
QUB73_05125
Transcription factors [BR:
ragg03000
]
Prokaryotic type
Helix-turn-helix
XRE family
QUB73_05125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
HTH_3
Peptidase_M78
HTH_31
HTH_19
HTH_26
HTH_25
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
WJS03650
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Position
complement(1104169..1105608)
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AA seq
479 aa
AA seq
DB search
MSKKLYSGHTLRQIRSDFGLSQVEFAKKIGLSTAYVNQIENNNRPVTASVLLTINRIFGV
DLSAFEQNDLDRVVQDLQEIFADTQFLTASVGRQEVHELVTRAPGVTKAIMDLYGALRTY
HDREANEDDLVQLGGSPESGPGPRKSAYEEVRDYFHYMDNYVDSIDRAAEKLSLEIGLSK
APSKFTALTTWLQERFGISVTEFPDYRGTLIRQDDFARTIALYSAIPQSTKSFLLGSVVA
ELCVRDLISEEVTRARFKTKSAESIARLALRNYFAGALILAYDDFLKTAAETRHDIQLLS
NRLDASIETVCHRLSTLQRPGAKGLPFYFVKIDRAGNVVKRHSATRFQFARFGGSCPRWN
VHQAFEQNSNKFTSQVAQMPDGVRYLCVATSITKHQPDYRSGERRYALGIGCEVQYADAV
VYADGLAVDEISSPEPIGVNCRICPRDNCDQRAFPAVDKEPFIDSGQRGIVPYRVKAAD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaaactctattccggccacacgttgaggcaaatccgctcggatttcggcctt
tcccaggtggagtttgcaaagaaaatcggcctgtccaccgcctatgtgaaccagatcgaa
aacaacaaccgcccggtcaccgcctcggtgttgctaacgattaacaggatctttggcgtc
gatctgtcggccttcgagcagaacgaccttgaccgggtggtgcaggatctccaggaaatt
ttcgccgacacccagtttctgacagcctccgtcggccggcaggaagtgcatgaactggtc
actcgggcaccaggcgtcaccaaggcgatcatggatctttacggcgcgctgcggacctat
cacgaccgggaagcgaacgaggacgatctggtccagctcggcggtagtccggaaagcggt
cccggacctcggaaatccgcttatgaagaggtccgcgactatttccactacatggacaat
tacgtcgacagcatcgaccgggccgcagagaagctctctctggagatcggactttcgaaa
gccccttcgaagttcaccgccctgaccacctggcttcaggaacgcttcggcatttcagtc
acggaatttccggactatcgaggcacgttgatccgtcaggacgatttcgcccgtaccatc
gcgctctatagtgccattccgcaatcgaccaagagcttcctgcttgggtcagtcgtcgcc
gaactgtgtgtccgggacctaatttcggaagaggtcaccagggcaaggttcaagaccaag
tcggcggaaagcatcgcgcggctggccttgcggaactatttcgcgggcgccttgatcctg
gcctatgacgacttcctgaaaaccgctgcggaaacccggcacgatatccagcttctttcg
aaccggctggacgccagtatcgagaccgtctgccaccgtctgtcgactttgcagcgcccc
ggcgccaaaggtctgccgttctacttcgtgaagatcgaccgggccggcaacgtcgtcaaa
cgccacagcgcaacccggttccagttcgcccgcttcggtggctcctgcccgcgctggaac
gtccatcaggcctttgaacagaactccaacaagttcacctcgcaggtcgcccagatgcct
gacggagtacgctatctttgcgtggcgaccagcatcaccaaacaccagccggactaccgc
agcggcgagcgccgctacgcgcttggtatcggctgcgaggtgcaatatgccgatgcggtc
gtctatgccgacgggcttgcggtcgacgagatctcctcgcccgagcccattggcgtcaac
tgccgcatctgtccgagggacaattgcgaccagcgcgccttcccggccgtcgacaaggaa
cccttcatcgattcaggccagcgcggtatcgttccgtatcgggtgaaggcggctgattag
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