Roseibium aggregatum: QUB73_05435
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Entry
QUB73_05435 CDS
T11280
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
QUB73_05435
Enzymes [BR:
ragg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
QUB73_05435
Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
QUB73_05435
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
FG-GAP_3
HTH_3
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
WJS03712
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All DBs
Position
1177195..1178466
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AA seq
423 aa
AA seq
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MRNLAQLTANVKTILPFSGRLRTLGRRLLLTAAATGALLAVSVPAQADQGFSQFVSGFWP
TAKAAGISSQTYNAVFTGMQPDDDTLRLMSKQSEFVKPIWDYLDSAVSDTRVEKGREMLK
EYSQVLAVIENRYGVDREAVLAIWGMETNYGGFMGRHNVIQALATLAYAAPRRKSFWETE
LVTALAIVQAGHVRFQDMEGSWAGAMGHTQFMPSSWKAYAADYDGDGRRDIWTSIPDALA
STAAYLQKHGWQTGKTWGYEVALPSGFDYHMADGEKTLTLGEWGRYGIRRSNGKDFPRPS
DNAILVLPAGASGPAFLMLKNFYVIKRYNNATAYALAVGHLADRIIGGGPIEGDWSREHL
PLNRSETAELQALLNQRGFSVGTADGRIGPATRKGIRAYQRSRGMVPDGYASIVLLARLK
LDG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaccttgcgcagctgactgcgaacgtgaaaaccatattgcccttttcaggaaga
ctgagaaccctcgggcgccggctgcttttgactgccgcggcgacgggcgctttgctggcc
gtttcggtgccggcacaggccgatcaggggttcagccagttcgtttccggcttctggccg
acggccaaggcagccggcatttcttcccagacctacaacgcggtcttcaccggcatgcag
ccggacgatgacaccttgcgcctgatgagcaagcaatccgagttcgtgaaaccgatctgg
gattatctcgatagcgccgtttcagacacgcgggtcgaaaaaggccgcgagatgctgaag
gagtacagccaggttcttgcggtcatcgaaaaccgctacggcgtcgatcgtgaagccgtc
ctggcgatctggggcatggaaaccaactatggcggcttcatggggcgtcataacgtaatc
caggcactggcgacgctggcctatgcggcgccgcgccggaagagcttctgggaaacggaa
cttgttaccgcgctggcgatcgtccaggcaggtcatgttcgtttccaggacatggaaggt
tcctgggccggcgccatggggcacacccagttcatgccctctagctggaaggcctatgcc
gctgactatgacggtgacggccgccgggatatctggacgtccatacccgatgcactcgcc
tcaaccgctgcctatctgcaaaagcacggctggcagacaggcaagacctggggatacgag
gtagccttgcccagcgggttcgactatcacatggccgatggcgaaaagacgctgacgcta
ggcgaatgggggcgatacggaattcgccggtcaaacggcaaggattttccgcgaccgtcc
gacaacgccatcctggttctgcctgccggagcaagcggaccggcgttcctgatgctgaag
aacttttacgtgatcaagcgttacaacaacgcgactgcctatgcgcttgccgtcggccat
cttgccgaccggatcattggcggcggaccgatcgagggcgactggtcgcgcgagcacctt
ccgctcaatcgctcggaaaccgcggaattgcaggcgcttttgaaccagcgtggattttct
gtcggtacggcggacggcaggatcggacctgctacccgaaagggtatccgagcctatcag
cgctcacgtgggatggttcccgacggttatgcatccattgttttgctggcacgcctgaag
ctggacggctaa
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