Roseibium aggregatum: QUB73_05835
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Entry
QUB73_05835 CDS
T11280
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ragg Roseibium aggregatum
Pathway
ragg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QUB73_05835 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ragg03400
]
QUB73_05835 (ruvB)
Enzymes [BR:
ragg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QUB73_05835 (ruvB)
DNA repair and recombination proteins [BR:
ragg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QUB73_05835 (ruvB)
RecFOR pathway proteins
QUB73_05835 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_22
AAA_14
nSTAND3
AAA_2
Rad17
AAA_18
RNA_helicase
AAA_28
AAA_17
AAA_33
TsaE
NTPase_1
AAA_24
NB-ARC
MCM
ABC_tran
Bac_DnaA
DUF815
Sigma54_activ_2
IstB_IS21
AAA_7
NACHT
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
WJS03786
LinkDB
All DBs
Position
1255213..1256253
Genome browser
AA seq
346 aa
AA seq
DB search
MSDDTRIVTPEIRGDEIDSTMRPQVLDDFVGQAQARANLKVFIGAAKARGEALDHVLFVG
PPGLGKTTLAQIMARELGVNFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEVLYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLQ
FYTVPELEHIVKRGAAILGIGMVEDGAREIAKRSRGTPRIAGRLLRRVRDFAIVAGVERV
DRELADRALLQLEVDGAGLDSLDRRYLSQIAVNFGGGPVGIETIAAALSEPRDAIEEIVE
PYLIQNGFLQRTPRGRILTPMAFEHLGLAAPSRPDAPQMGLFTDPE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacactcgcatcgtgacgccggaaatccggggggacgagatcgattcaacc
atgcgcccccaggtgctggatgattttgtcggtcaggcccaggcgcgcgccaatctgaag
gtctttatcggtgcggcaaaggcacggggtgaggcgctggaccatgtgttgttcgtcggg
cctcccggtctcggcaagacgacactggcgcagatcatggcacgcgaactgggggtcaat
ttccgggcgacctccggtcctgtcattgccaaggcgggcgaccttgccgcacttctgacc
aacctggaagagcgcgacgtcctcttcatcgacgagatccatcggctcaatccggcagtc
gaggaagtgctttatccggcgatggaagatttccagctcgacctgatcatcggtgaagga
ccggctgcgcgatcagtcaagatcgacctggcgaagttcacgctcgttgccgcgacgacg
cggctgggcctcttgaccactccgctgcgcgatcgcttcggcattccggtcaggctgcag
ttctacacggttccggagctggagcacatcgtcaagcgtggcgccgccattcttggcatc
ggcatggttgaagacggtgcccgcgagattgccaaacgctcccgcgggacaccacgtatc
gccgggcgactgctgcggcgggtaagggattttgccattgtcgccggcgtcgagcgcgtc
gacagggaactcgccgacagggcgcttctgcagctggaagtcgatggtgccgggctcgac
agtctcgaccgtcgctatctgagccagatcgcggtgaatttcggtggtgggccggtcggg
atcgagacaattgcggcggcgctttccgagcctcgtgatgccatcgaggagatcgtcgaa
ccctacctgatccagaacgggtttctgcagcggacgccaaggggacgtatcctgacgccg
atggcgttcgaacacctgggtcttgcggccccatccagaccggatgcgccgcaaatggga
ctgttcaccgatcccgaatag
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