Roseibium aggregatum: QUB73_05940
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Entry
QUB73_05940 CDS
T11280
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ragg03021
]
QUB73_05940 (rpoH)
Transcription machinery [BR:
ragg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QUB73_05940 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_11
Sigma70_r4_2
GntR
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
WJS03806
LinkDB
All DBs
Position
complement(1282609..1283493)
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AA seq
294 aa
AA seq
DB search
MAQNVPTLTAGEGGLSRYLDEIRKFPMLQPQEEYMLAKRYKEHEDPEAAERLVNSHLRLV
AKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSW
SLVKMGTTANQKRLFFNLRRLKGKIQALDEGDLKPHQVSEIATKLGVSEEEVVSMNRRLG
GDASLNAPVRAEADAGEWQDWLVDESDSQETLLANQEELDMRRKMLNDAMDVLNERERRI
FEARRLAEDPMTLEDLSGEFGVSRERVRQIEVRAFEKVQKAVRNSARTMDQPAA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaacgttccgacgcttacagcaggggaaggcggtctcagccggtatctggac
gagatccgcaagtttccgatgcttcagccgcaggaagagtacatgctcgccaagcgctac
aaagagcatgaagaccctgaagctgcagaacgcctagtcaattcccatctacgcctcgtc
gccaagattgccatgggttaccgcgggtatggcctgccgatcggagaagtcgtttccgaa
ggcaacgtcggcctgatgcaagcggtcaagcgctttgaaccggacaaggggttccggctc
gcgacctatgccatgtggtggatcaaggcggcgatccaggaatacatcctgcgctcatgg
tccctcgtgaaaatggggaccacggccaaccagaaacgcctgttcttcaacctgcgtcgc
ctcaagggcaagatccaggcgttggacgaaggcgatctgaagccgcatcaggtctctgag
attgccaccaaactcggggtgtccgaggaggaagtggtgtccatgaaccgccgtctgggc
ggcgatgccagcctgaatgcgcccgtgcgcgcggaagctgatgccggtgaatggcaggac
tggcttgtcgatgaaagcgacagtcaggaaaccctgcttgccaatcaggaagagctggac
atgcgtcgcaagatgctgaacgacgcgatggacgtactcaacgagcgcgaacggcgcatc
tttgaagcacgccgtctggctgaagacccgatgacgctggaagacctttcgggcgaattc
ggtgtcagccgcgagcgcgtccgccagatcgaggttcgcgcattcgaaaaggttcagaaa
gccgtgcgcaacagcgcccgcacaatggaccagcccgccgcctga
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