Roseibium aggregatum: QUB73_09770
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Entry
QUB73_09770 CDS
T11280
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00470
D-Amino acid metabolism
ragg00550
Peptidoglycan biosynthesis
ragg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QUB73_09770 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QUB73_09770 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
QUB73_09770 (murD)
Enzymes [BR:
ragg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QUB73_09770 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
Precursor biosynthesis
Amino acid ligase
QUB73_09770 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
TrkA_N
MurD-like_N
KARI_N
UDPG_MGDP_dh_N
NAD_binding_2
AdoHcyase_NAD
CbiA
Motif
Other DBs
NCBI-ProteinID:
WJS04542
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Position
2135945..2137345
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AA seq
466 aa
AA seq
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MIPVTTFDGRKVALFGLGGSGFATARALKAGGADVVCFDDNETRVAQAAGEGLATQDLRD
LDWSDVDALVLAPGVPLTHPVPHWSVELARDASVEIVGDVELFCRERRKQCPSAPLIAIT
GTNGKSTTTALIAHLLKALGRDVQLGGNIGTPVLELDPPQPGRHYVVECSSYQIDLAPTL
DATVGIHMNLSPDHLDRHGSMENYAAIKERLVAGAKVAVVGVDDRLSSAIADRLELARKP
VCRIAGEKELTNGIYARHGRLIEAHDGSQIEVALLGGIDSLRGDHNGQNAAAAFAALRAL
EIPAAQIAEALKTFPGLHHRMEVVEKKGRVLYINDSKATNADAAARALASFDRIYWIAGG
RAKAGGISSLDEYFPKIAKTFLIGEAAQDFAKTLDGRVPFKISGTLTQAVQDAAAEAAED
GAAEIAILLSPACASFDQFPNFELRGAAFVDAVRALPNSGNTQEVA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaccacattcgacggcagaaaggttgccctgttcgggctcggcgggtcc
gggtttgcaacggcgcgcgcgctgaaggcaggtggtgcggatgtggtctgtttcgacgac
aacgaaacccgggtcgcacaagctgccggcgaggggcttgcaacccaagaccttcgggac
cttgactggtcggacgttgacgcactggttcttgcacctggtgtgccgctgacccatccg
gtgccgcactggtcggtggagctggcgcgtgatgcgagcgtcgagattgtcggcgatgtc
gagcttttctgccgtgagcgacggaaacaatgcccgtccgcgccgctgattgcgattacc
ggtaccaatggcaagtcgacgaccacggccctgatcgcgcatctcctgaaggccctcggc
cgggacgtgcaactcggcggtaacatcgggacgccggttctggagctggatcctccacaa
cccggtcgccactatgtggtggagtgctcttcctaccagatcgatttggcgccgaccctg
gatgcaacggtcggcattcacatgaacctgtcgccggatcatctcgatcgtcacgggtcc
atggaaaactacgccgctatcaaggagcggcttgttgccggtgccaaggtcgcggtggta
ggagttgacgaccggttgtcctcagcaatcgccgacagacttgaacttgcacgcaagccc
gtgtgccggatcgctggtgaaaaggaactcaccaacggtatttacgctcgccacgggcga
ttgatcgaggcgcatgacggcagccagatcgaagtggcgctgcttggcgggatcgacagt
ctccgcggcgaccacaacggacagaatgcggcggctgccttcgcggctctgcgtgcgctg
gaaattccggcagcgcagatcgcagaagccctcaagaccttcccgggacttcatcaccgc
atggaagtggtggagaagaagggccgggttctctatatcaacgattccaaggctaccaac
gctgacgctgcggccagagcattggcaagtttcgaccggatctactggatcgcgggcggc
cgggccaaggcgggcggtatctcctcgctggacgaatatttcccgaagatcgccaagacc
ttcctgatcggagaggcggctcaggatttcgccaagacgctggatggccgcgtgcccttc
aagatcagcggaacgctgacccaggccgtgcaggacgccgctgccgaggcggcggaggac
ggtgcggctgaaatcgccatacttttgtcgcccgcctgtgcgagcttcgaccaattcccg
aattttgaactgcggggcgctgcttttgtagatgcggtgcgtgccttgcccaattccggc
aatacccaggaggtcgcctga
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