Roseibium aggregatum: QUB73_10940
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Entry
QUB73_10940 CDS
T11280
Name
(GenBank) PAS domain-containing protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
ragg Roseibium aggregatum
Pathway
ragg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QUB73_10940
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ragg01001
]
QUB73_10940
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ragg02022
]
QUB73_10940
Enzymes [BR:
ragg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
QUB73_10940
Protein kinases [BR:
ragg01001
]
Histidine kinases
Cell cycle family [OT]
QUB73_10940
Two-component system [BR:
ragg02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
QUB73_10940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
Response_reg
PAS_8
PAS
PAS_9
HisKA
YfiO
Motif
Other DBs
NCBI-ProteinID:
WJS04767
LinkDB
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Position
2385880..2388432
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AA seq
850 aa
AA seq
DB search
MSDMDGTPSGPMISRPERSGNIGLLIGLALLLVGAAAAFAVMDREVAQPFILALLGILAV
VGVFCLFAGAIGFLRLSARPGEANPLASAFVDTLEDGALITDLDGRLVYANKAYADLTGA
ETAADIRVVERVFSSDPDAADAIFRLSQAMRDSRRAQEEIRMPFPLGRADGAARWYRVSI
RPLQVSKERGGGKPMAVWQLADITRDRAEQENSFQELQRVINFLDHAPAGFFSCDAEGRI
VYLNATLADWLGYDLAQFDAGDLDLSSIVRGDGTELIRSIKGQAGEVKSETFDLDFVTRN
GRGLPVRLLHRVPFGENGQPGDSRTLVLNRSRGEEASEALRAAEVRFARFFNNTPIAIAS
LDKEGRVLRTNAPFLKLFGAVDTDDESPKLEAYVAESGRQELAKSLQAAANGIGEIAPID
IPLVEGNDPRSATFYVSAVQEGEGDGEAAIVYALETTQQRALEAQFAQSQKMQAIGQLAG
GVAHDFNNVLTAIIGFSDLLLASHRPTDPSFQDIMNIKQNANRAAGLVRQLLAFSRRQTL
RPQQLELNDVLADLSILLDRLLGEKVELKVIHGRDLWPVMADLNQLEQVIVNLAVNAGDA
MSDGGRLTIRTRNVNEAESTQFDNIRGMPPGEYTLVEVDDTGHGIPPDVMEKIFDPFFST
KEVGKGTGLGLSTVYGIVKQTGGFIFCTSEVDVGTTFRLFLPRHIPKVVEKKKPEPKEVE
PEKVKDLTGSASILLVEDEEAVRAFGARALASRGYTVYEAGSGNEALEVMEETDGKIDLV
VSDVVMPEMDGPTLLVELRKTRPDLKIIFVSGYAEDAFEENLPPGEQFFFLPKPFTLKQL
ATTVKDVLNG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatggacgggacgccgagcgggccgatgatcagccgcccggaacgttccggt
aatataggccttctcattggcctcgcactgctgctcgtcggcgctgctgctgcctttgcg
gtcatggaccgcgaagtggcgcagccgtttattcttgcgctgctcggtatcctggccgtc
gtcggcgttttctgcctgtttgccggagccataggctttctgcgcctgtcagcccgccct
ggcgaagccaatccgcttgcctccgcttttgtcgatacccttgaagacggagcgctcatt
accgatctggacggccggcttgtttatgccaacaaggcctatgcagatctgaccggcgct
gaaaccgctgccgacatccgtgtggtcgagcgtgtgttttcctccgatccggatgccgcc
gacgccattttccgcctgtcccaggccatgcgcgacagccgcagggcgcaagaagagatt
cgcatgccgttcccgctcggcagggccgacggcgctgcgcgctggtatcgggtgtcgatc
cgcccgttgcaggtgtccaaggaacgcggcggcggcaagcccatggcggtctggcagctg
gccgatatcacccgcgaccgggccgaacaggaaaactcgtttcaggaactgcagcgcgtc
atcaatttcctggatcacgcgccggccggtttcttctcctgtgatgcggaaggccgcatc
gtctatctcaacgccactctggccgactggcttggctacgatcttgcccagttcgacgcg
ggcgacctcgatctttcgagcatcgtgcgcggtgacggcaccgagctgatccgctcgatc
aagggtcaggcgggcgaggtcaagagcgaaacctttgatctcgacttcgtcacccgcaac
ggacgcggcctgccggtgcgactgctccaccgtgtgcctttcggtgaaaacggccagccg
ggtgacagccgcacactggttctcaacaggtctcgcggtgaggaagcctccgaggcgctt
cgggcggcggaagtccgctttgcccgtttcttcaacaacacgccgatcgccattgcctcg
ctcgacaaggaaggccgggtcctgagaaccaacgcgccgttcctgaagctgttcggtgcg
gtcgacacggatgacgaatctcccaagctggaggcttatgtggccgagagcggacggcag
gaactggcgaaatctctccaggctgctgccaacgggatcggcgagattgcgccgatagac
attcccctggtcgagggcaatgacccgcgttccgcaaccttctacgtttccgccgtgcag
gaaggtgagggtgacggcgaagccgccatcgtttacgcgcttgaaaccacccagcagcga
gccctggaagcccagttcgcccagagccagaagatgcaggccatcggccagctggccggg
ggcgtcgcgcatgacttcaacaacgtcctgactgcgatcatcggcttctcggatctgctt
ctggcaagccacaggccgaccgatccgtccttccaggacatcatgaacatcaagcagaac
gccaaccgtgcagccggccttgtgcggcagcttctggccttctcgcgtcgtcagacgctg
cgtccgcagcaactggagctgaacgacgttctggcagatctctccatcctgcttgaccgc
ctgctgggcgagaaggtggaactgaaggtgatccacggccgggacctgtggccggtgatg
gccgacctgaaccagctggaacaggtgatcgtcaacctggccgtaaacgcgggcgatgca
atgtccgacggtggccgtctgaccatccgtacgcgcaacgtcaacgaagccgaaagcaca
cagttcgacaacatccgcggcatgccaccgggcgaatacacccttgtcgaggtggatgac
acgggtcacggcattccgcccgacgtgatggagaagatcttcgatccgttcttctccacc
aaggaagtcggcaagggaacgggccttggcctgtcgacggtttacggcatcgtcaaacag
accggcggtttcattttctgtacctccgaagtcgatgtcggcacgacgttccgtctgttc
ctgccgcgtcacattccgaaggtcgtggagaagaaaaagccggagccgaaggaagtcgaa
ccggaaaaggtcaaggatctgaccggttccgcatcgatcctgctggtggaagacgaggaa
gccgtgcgtgcctttggcgcccgcgccctcgcgtcgcgcggctacaccgtctatgaggcg
ggctcgggcaacgaggcgctggaggtcatggaagagacagacggcaagatcgacctcgtg
gtctccgatgtggtcatgccggaaatggacgggccgacgcttctggtcgagctgcgcaag
acccggccggacctcaagatcatcttcgtgtccggttatgccgaggatgccttcgaggaa
aacctgccaccgggcgaacagttcttcttcctgcccaagcctttcacgctgaagcagctt
gcgacgactgtgaaggatgtcttgaacggatag
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