Roseibium aggregatum: QUB73_13920
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Entry
QUB73_13920 CDS
T11280
Name
(GenBank) SPOR domain-containing protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00550
Peptidoglycan biosynthesis
ragg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QUB73_13920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ragg01002
]
QUB73_13920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
QUB73_13920
Enzymes [BR:
ragg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QUB73_13920
Peptidases and inhibitors [BR:
ragg01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
QUB73_13920
Peptidoglycan biosynthesis and degradation proteins [BR:
ragg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
QUB73_13920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WJS00288
LinkDB
All DBs
Position
complement(2980018..2981703)
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AA seq
561 aa
AA seq
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MRIFRKGRALARTAKILTLGLVLLGVPATAMANPKYAGIVVDAKTGKTLYSSSADAYRYP
ASLTKIMTLYLVFEELEAGRLSLDSNLSVSSYASARPPSKLGLKPGGTIKVKDAILALVT
KSANDVASVIAENLGGSEKKFAERMTRTARQIGMSKTTFRNPHGLPDSGQRTTARDMATL
GRAIQERFPQYYGYFKTRAYKYNGRTYGNHNKLLGRVKGVDGIKTGYIRASGFNLVTSVN
RDGRQIVAVVMGGKTGASRNAQMTKLINSYLPKASRGPKTAPLIVQNITEPTFVAIALKN
PPLPNSKPGSEPVPATGEPMVLAFTAPSNPGAIPTPAPAPLPVTASNAPVMASAQAPAPV
PGFGNDVPLPPKLVKQRFDSTFAVATALPPIPPSSPDEPLNTNSISRTALIEAARAEVVK
SDNSQRSVGSAQSVKTVSVQTIAVNTTPVETVAAPETAAADNSSDDDSVTVATSDTRDVE
PGWQVQIAATESEGQAITMLKNAKAKTGSALRGRVPYTEPVDTNGQTLYRARFVGFDTKT
AAWNACKSLKKAKYACFAIYQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttttcgcaaaggacgggctctcgcccgcaccgctaagatcttgaccctcggc
ctggtgctcctgggggtcccggcaacggcgatggccaacccgaaatatgcggggatcgtc
gttgatgcaaaaaccggcaagacactttactcctcttcggctgacgcctaccggtatccg
gcatcgctcaccaagatcatgacgctttatcttgtgttcgaagaactggaagccgggcga
ctgtcgctggactccaacctgagcgtttccagctacgcttccgcacgtccgccctccaag
ctgggcctcaagcccggcggcacaatcaaggtcaaggacgccatcctcgcacttgttacc
aagtccgcgaacgacgtcgcatccgtgatcgctgaaaaccttggtggctctgaaaagaaa
ttcgccgagcgcatgacccgtacggcgcgccagatcggcatgtcaaagaccactttccgc
aacccgcacggcctgcccgacagcgggcagcgtacgacggcccgcgacatggcgacgctt
ggccgcgcgattcaggaacggttcccgcagtactacggctacttcaaaacccgtgcctac
aagtacaacggtcgcacctatggcaaccacaacaagctgctgggccgtgtaaagggcgta
gacggcatcaagaccggttacatccgggcatccggcttcaatctggtgacgtctgtgaac
cgggacggacggcagattgtggccgtcgtgatgggtggaaagaccggcgcgtcacgcaac
gcgcagatgacaaagctcatcaactcctatctgcccaaggcaagccgcggcccgaaaacg
gccccactgatcgttcagaacatcactgaaccgactttcgtggcaattgcgctgaagaac
ccgcctcttccgaacagcaagccgggaagcgaacctgtgcctgcaacgggtgagccgatg
gtgctggcattcaccgcaccgtccaaccctggcgccattccgacaccggctccggccccc
cttcccgtaactgcgtccaatgcgccagtcatggcttcggcccaggcccctgctccggtt
ccaggcttcggcaacgacgttccgctgccgccgaaactggtcaagcaacgctttgacagc
acgtttgcagtcgcaacagctctgccgccaatcccgccttcaagcccggatgagccgctg
aacaccaattcgatttcccggactgccctgatcgaagctgcaagagcagaagtcgtgaag
tcggacaacagccagcgctctgtcggctccgcgcagtcggtcaagacggtctccgttcag
acgatcgcggtcaacacgacgccggttgaaacggttgcagcgcctgaaaccgcagctgcc
gacaacagcagcgacgacgacagcgttacggttgcaaccagcgacacccgcgatgtcgag
ccgggctggcaggtccagatcgccgcaacagaatccgaaggccaggccatcactatgttg
aagaacgccaaggccaagaccggatccgcccttcgtggccgggtcccttacaccgaaccc
gtcgacaccaacggacagaccctctaccgggcccgcttcgtcggcttcgacaccaaaaca
gctgcgtggaatgcctgcaaaagcttgaaaaaggcaaaatacgcttgcttcgccatctac
cagtaa
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