Roseibium aggregatum: QUB73_15875
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Entry
QUB73_15875 CDS
T11280
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ragg Roseibium aggregatum
Pathway
ragg02024
Quorum sensing
ragg03060
Protein export
ragg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QUB73_15875 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QUB73_15875 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QUB73_15875 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ragg02044
]
QUB73_15875 (secD)
Secretion system [BR:
ragg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QUB73_15875 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
SecD-TM1
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
WJS00649
LinkDB
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Position
complement(3443186..3444796)
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AA seq
536 aa
AA seq
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MLYFARWKIALIVLVVAAGILTTLPNFFSQKQLESWPDFLPKNQMVLGLDLQGGAYLLYE
IDKQDYVQKRMKALVGDIRSTLREDPRIGYTGLGVQGDAAQVRIRDLTRLADAEERLQPL
VNPLASSVFGGQAVNEFDMTVTEDGLVRFSYSERGLEDRMTNIVQQSIEVIRRRVDELGT
TEPSIQRQGADRILVEAPGEDDPERLKDLVGQTAQLTFHMVDTSMSGEQALQNRPPAGTV
IMTSVDDPPIPYLLEEAPLLSGEDLVDAQVSFDQRNNEPVVNFRFNQSGARKFAQITQQN
VNRPFAIVLDNEVISAPVIREPITGGSGQISGSFTLEGANDLAVLLRAGALPAKLTVIEE
RSIGPGLGADSIEAGKLASIIGGGLVIVFMILAYGRFGIIADLALMVNIFLIFGALTMLQ
ATLTLPGIAGIVLTIGMAVDANVLIFERIREEARAGRSVISAVDAGFSRALGTILDANIT
TLIAAVILFQLGSGPVKGFAVTLAIGIFTTVFSAFTFSRLLVALWLRHRRPSKLPI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctctatttcgcacgctggaaaatcgcgctgatcgtgcttgtggttgccgctggcatc
ctgaccacgctgccgaatttcttctcccaaaaacaacttgaaagctggccggacttcctg
ccgaagaaccagatggttctcggtctcgaccttcagggcggtgcttatctgctttatgaa
atcgacaagcaggattacgtccagaagcgcatgaaggcgctggtcggcgatatccggtca
accctgcgcgaagatccgcgcatcgggtatacggggctcggagttcagggagacgccgct
caggttcgtattcgcgatctgacgcggctggccgatgcggaagagcgtctgcaaccactc
gtcaacccgctggcctccagtgtttttggcggtcaggcggtcaatgagtttgacatgacc
gtgacggaagacggtctggttcgattttcctattccgagcgtggccttgaggatcgcatg
acgaatatcgtccagcaatccatcgaggtcatccggcgtcgtgttgatgaactggggact
acggaacccagcatccagcgccagggcgccgaccggattctggtcgaagcgccgggtgaa
gatgatccggaacgcttgaaagatctcgtcggccagacggcgcagctcactttccacatg
gtcgatacgtccatgtccggcgaacaggcgcttcagaaccgtccgcctgcaggcactgtc
atcatgacttcggttgatgatccgcccattccttatcttctcgaggaagcgccgctcctg
tcgggcgaagaccttgtcgatgctcaggtcagcttcgatcagcgcaacaacgaaccggtt
gtgaacttccgcttcaatcagtccggcgcccgcaagttcgcccagatcacgcagcagaac
gtcaaccgtccgttcgcaatcgtgctcgacaatgaagtcatttccgcgccggttatccgt
gagccgatcaccggtggttcaggtcagatttccggcagcttcacgctggagggcgccaac
gaccttgccgtgctgttgcgcgccggtgcgttgccggccaagctgaccgtcatcgaggaa
cgctccatcggtccgggcctcggcgctgactccattgaagcaggcaagttggcgtctatc
atcggcggcggtctggtgatcgtcttcatgatccttgcctatggccgcttcggcatcatc
gccgaccttgctctgatggtgaacatcttcctgatcttcggtgcgctgacaatgctgcag
gcaacactgaccttgcccggcattgcaggtatcgttttgacgatcggtatggcggtggat
gcgaacgtgctgattttcgagcgtattcgcgaagaagcaagggcagggagatctgtcatt
tctgcggtggatgcaggcttcagccgtgccctcggtacgatcctggatgccaacatcacg
accctgatcgccgccgtgatcctgttccagctcggctcgggtccggtcaagggcttcgcc
gtgacattggccatcggtatcttcaccacagtgttctcggcattcacgttcagccggttg
ctggtagccctttggctccgccaccgccgtccgtcgaaattgccgatttga
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