Roseibium aggregatum: QUB73_17045
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Entry
QUB73_17045 CDS
T11280
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ragg03400
]
QUB73_17045
Enzymes [BR:
ragg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QUB73_17045
DNA repair and recombination proteins [BR:
ragg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QUB73_17045
Prokaryotic type
QUB73_17045
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WJS00871
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Position
complement(3713462..3714898)
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AA seq
478 aa
AA seq
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MTTLVWFRQDLRIKDNPALFEAARKGRVLPVFILEPAEQAGETHPLGGASLWWLHHSLAS
LKADLPGLIFLRGSARHLIPQLAKEVGAEAVVWNRCYEPHAIERDTDLKKVLKEDGFEVK
SFKASLLYEPWELETKSGGPFKVYSPFWKAAQQKTIDDALPAPEKLEFADYDGGETLESF
DLLPTKPNWAKGWEDCWQPGEAGAAERLEGFFEEGLKGYGTLRNRPDLPNVSRLSPHLHF
GEISPRQIWHATQKVMDRKSSVAGDGMKFLSEIAWREFAYHLLYHFPKLPSDNWRSTFDA
YPWQEPGDALEKWQKGQTGYPIVDAGMRELWQTGYMHNRVRMIVASFLIKHLRIHWHHGE
AWFRDTLVDADLANNSASWQWVAGSGADAAPYFRVFNPITQGEKFDPDGVYIRKWVPELR
DLDTHYLFAPFDAPAETLKKAGIALGETYPKPLVDHAKARKAALDGYEAVKQAGQDAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacttgtttggtttcgacaggatttgcgcatcaaggacaatccggccctgttc
gaggcggcccgcaagggacgtgtccttccggttttcatccttgaaccagcagagcaggcc
ggtgaaacgcacccgcttggcggggcaagcctctggtggctgcatcacagcctggcgtcc
ttgaaggcggatctgccggggctgatcttcctgcgcgggagcgcgcgacacctgatccca
cagcttgcaaaggaagtcggggccgaggccgtcgtctggaaccgatgctacgaaccacat
gcaatcgagcgggacaccgatctcaagaaggtgctgaaagaagacgggtttgaggtcaaa
agcttcaaggcgtccctcttgtacgaaccctgggaactggagacaaaatccggtggcccc
ttcaaggtgtattcgccgttctggaaagctgctcagcaaaagaccatcgatgacgccttg
ccagcaccggagaagctggaatttgcggactacgatggcggtgaaacgcttgagagcttt
gacctcttgcccacgaagcctaactgggcaaaggggtgggaggattgctggcagcccggt
gaagccggcgctgcggagcggctggaaggcttcttcgaggaaggcttgaagggctatggc
acattgcgcaatcgtccggatcttccgaacgtgtcgcgcttgtcgccgcatctccacttc
ggcgaaatctcaccccgacagatctggcatgcaacgcagaaggtaatggaccggaaatcg
tcggttgccggtgacggtatgaaattcctgtccgagattgcctggcgggaatttgcgtac
cacttgctctaccatttcccgaaattgccgtcggacaactggcgttcaacgttcgatgcc
tatccctggcaggagccgggcgacgcgttggagaagtggcagaaaggacaaacgggatat
ccgattgtcgacgccggcatgcgcgaactctggcagaccggatacatgcacaaccgggtg
cgcatgatcgtggcgagtttcctgatcaagcatctgcgtattcattggcaccatggcgag
gcctggtttcgggacacgctggtggatgcggaccttgccaacaattccgcaagctggcag
tgggtcgctggatcaggtgctgatgcagctccctattttcgggttttcaacccgatcaca
cagggagaaaaattcgatccggacggtgtgtacatccgcaaatgggttccagagctgcgc
gatctggacacgcactatctctttgcaccgtttgatgccccggccgaaaccctgaaaaag
gccggtatcgcgcttggcgagacctatccgaaaccgctggtcgaccatgccaaggcacgc
aaggcggcgctcgacggctatgaagcggtgaagcaggcgggacaagacgccgcttga
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