Roseibium aggregatum: QUB73_17140
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Entry
QUB73_17140 CDS
T11280
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00260
Glycine, serine and threonine metabolism
ragg00270
Cysteine and methionine metabolism
ragg00450
Selenocompound metabolism
ragg00670
One carbon pool by folate
ragg01100
Metabolic pathways
ragg01110
Biosynthesis of secondary metabolites
ragg01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QUB73_17140
00270 Cysteine and methionine metabolism
QUB73_17140
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
QUB73_17140
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QUB73_17140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ragg04147
]
QUB73_17140
Enzymes [BR:
ragg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
QUB73_17140
Exosome [BR:
ragg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
QUB73_17140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WJS00889
LinkDB
All DBs
Position
3732482..3733648
Genome browser
AA seq
388 aa
AA seq
DB search
MPKTPSIAHGLHLDSLLAHGGGGFDAATGAIVPPIQTATTFVRDETYELVNPGHIYSRDD
NALFKKTEKLIAALEGGEDSRLFASGMAAVAAVARIVKPGGTLLAQSGIYWGTTLFLRKM
CARNNIALVEADASDLQSFQDEIAVTRPDLVWLEVPSNPFLKVADIKNIANQCKQADALL
AVDATAATPLILKPLSLGADLVMHSATKALNGHSDLLGGVVTTDNAGSEAWAFLTEERKL
AGAVLGSFETWLLLRGLRTLALRVERMNRSAQVFAEHFEKHPKVEAVLYPGVKSHPHHEL
AKSQMTGGFGSLMSIQVKGDKTAALNVTGALDLFQRATSLGGTESLVEHRFTIEGEGSGI
PENLLRLSIGIEHCDDLIADMEQALAAI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacgccctccattgcccatggcctacacctcgacagcctgctggcccatggt
ggtggcggttttgatgcggcaacaggcgccatcgtgccgccgatacagactgctaccaca
ttcgtgcgtgacgaaacctatgagctggtcaacccgggtcatatctacagccgtgacgac
aatgcgcttttcaagaagaccgaaaaactgatcgccgctcttgaagggggagaagacagc
cggctgtttgcatccggcatggctgcagtcgccgcagtcgcccgtatcgtcaaaccgggc
ggcacattgcttgcccaatccggcatttactgggggaccacgttgttcctgcgcaagatg
tgtgcacgcaacaacattgccctcgtagaagctgatgcaagcgaccttcagtccttccag
gacgagatagccgtcactcgcccggatcttgtctggcttgaagtgcccagcaatccgttc
ttgaaggtcgccgacatcaagaacatcgccaaccagtgcaaacaggcggacgccctgctt
gccgtagatgcgaccgccgcaacaccgctgatcctcaagcctctgtcgctcggagcggac
ctggtgatgcattcggcgaccaaggccctcaacggtcattcagaccttctgggtggcgtc
gtcacaaccgacaacgcgggcagcgaagcctgggcgtttctgaccgaggaacgcaagttg
gccggcgccgtgctcggttcgttcgaaacctggcttttgctccggggcctcaggacactt
gcattgcgtgtggagcgcatgaacagatcggcacaggttttcgcggaacacttcgaaaaa
cacccgaaagtggaagccgtgctttatcccggcgtcaagagccaccctcatcacgaactt
gcaaaaagccagatgaccggcggttttggctcgctcatgtccattcaggtcaagggcgac
aaaacggccgccttgaatgtcaccggtgcgcttgacctgttccagcgagcaacctccctc
ggcggtaccgagagtcttgtcgagcatcgtttcacaatcgagggcgaaggctccggcatt
ccggagaacctgttgcggctgtccatcggcatcgagcattgcgacgacctgatcgcggac
atggagcaggctctcgctgcaatctga
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