Roseibium aggregatum: QUB73_18810
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Entry
QUB73_18810 CDS
T11280
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00260
Glycine, serine and threonine metabolism
ragg00460
Cyanoamino acid metabolism
ragg00630
Glyoxylate and dicarboxylate metabolism
ragg00670
One carbon pool by folate
ragg00680
Methane metabolism
ragg01100
Metabolic pathways
ragg01110
Biosynthesis of secondary metabolites
ragg01120
Microbial metabolism in diverse environments
ragg01200
Carbon metabolism
ragg01230
Biosynthesis of amino acids
ragg01240
Biosynthesis of cofactors
ragg04981
Folate transport and metabolism
Module
ragg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QUB73_18810 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QUB73_18810 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QUB73_18810 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QUB73_18810 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QUB73_18810 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QUB73_18810 (glyA)
Enzymes [BR:
ragg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QUB73_18810 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WJS01212
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Position
complement(4102742..4104052)
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AA seq
436 aa
AA seq
DB search
MSLMESSDQSLQSGFFTRSLAEADPDIFDTIGKELGRQQHEIELIASENIVSRAVLEAQG
SIFTNKYAEGYPGKRYYGGCEFADIAETLAIERAKELFGCQFANVQPNSGSQMNQAVFLA
LLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREDDHLLDMDEVERLANEHKP
KLILAGGTAYSRIWDWKRFREIADSIGAYLMVDMAHIAGLVAGGVHPSPVPHAHVVTTTT
HKSLRGPRGGMILSNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALQPEFKAYAR
AVQENAKVLAEVLKEQGLDIVSGGTDNHLMLVDLRPKNATGKVAEKSLGRANITCNKNGI
PFDPEKPFVTSGVRLGTPAATTRGFGVAEFREVGLLITEVLDGLKAANSEEGNAAVEAAV
KAKVEALTARFPIYGG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatggaaagctccgatcagtccctgcagtccggtttcttcacccgcagcctt
gctgaagccgatccggatatcttcgacacgatcggcaaggaactcggccgtcagcagcat
gaaatcgagctgattgcttcggaaaacatcgtttcccgcgcagtgctggaagcacagggc
tcgatcttcaccaacaaatatgccgaaggttatccgggcaagcgctactatggcggttgt
gagttcgccgatattgccgaaacgctggcaatcgagcgcgcgaaggaactgttcggctgc
cagtttgccaacgttcagccgaactccggcagccagatgaaccaggcggtgttcctggct
cttctgcagcctggcgacaccttcatgggcctggatctcaactccggtggtcacctgacc
cacggttccccggtcaacatgtccggcaagtggttcaacgtcgtctcctatggcgtgcgt
gaggacgaccatcttctcgacatggatgaggtcgagcgccttgccaacgaacacaagccc
aagctgatcctggccggcggcaccgcctattcccgtatctgggactggaagcggttccgc
gaaatcgccgacagcattggtgcctatctcatggtcgacatggcgcatatcgccggtctg
gttgcaggtggggtccacccgtcgccggttccgcacgcccacgtcgtcaccaccaccacc
cacaagtccctgcgcggtccgcgcggcggcatgatcctgagcaacgacgaagcgatcgcc
aagaagatcaattcggccgtcttcccgggtcttcagggtggcccgctgatgcacgtcatt
gctgccaaggccgttgccttcaaggaagcactgcagccggaattcaaggcttatgcccgc
gccgttcaggaaaatgccaaggttctggctgaagtcctgaaggaacagggtctggatatc
gtttccggcggcaccgacaaccacctgatgctggtggatctgcgtccgaagaacgccacc
ggcaaggtggctgaaaaatctctcggccgcgccaacatcacctgcaacaagaacggtatc
ccgttcgacccggaaaagccgtttgtcacgtctggcgttcgtctcggcaccccggcagcg
accacacgcggcttcggtgttgcggaattccgcgaagtcggtctgctgatcacggaagtg
ttggacggtttgaaggccgcaaacagtgaagagggcaacgcggcagttgaagcggcggtc
aaagccaaggtagaagcactgacggcccggttcccgatctacgggggctaa
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