Roseibium aggregatum: QUB73_18880
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Entry
QUB73_18880 CDS
T11280
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ragg Roseibium aggregatum
Pathway
ragg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QUB73_18880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ragg03400
]
QUB73_18880
Enzymes [BR:
ragg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QUB73_18880
DNA repair and recombination proteins [BR:
ragg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QUB73_18880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WJS01226
LinkDB
All DBs
Position
complement(4117716..4118375)
Genome browser
AA seq
219 aa
AA seq
DB search
MSDYIADHGPVDPPSDCPACPRLVALREELKVAYPDWHNAPVPSFGADAPRLLIIGLAPG
MKGANCTGRPFTGDYAGDLLYQTMIEFGFAAGTYKARPDDGLQLKDAMITNAVRCLPPQN
KPTGAEIKTCRPYLLSTLDANPSIKAVLALGRIAHETFLSALDQRRASFAFAHGARHELP
GTGLTLFDSYHCSRYNTNTGRLTEEMFHSVFRQIRSFIP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattatatcgcagaccatgggccagtcgatcccccatcagattgtccggcctgt
ccccgccttgttgccctgcgtgaagagctgaaagttgcctatcccgactggcacaacgcg
ccggttccgtcattcggagccgacgcgccgcgtcttctgatcatcggcctggctccgggc
atgaaaggggcgaactgcacgggccgcccctttacaggggactatgcgggagatctcctc
taccagaccatgatcgaattcggttttgccgcagggacctataaggcccggccggacgac
ggtctgcagttgaaggatgcgatgatcaccaacgcggtgcgctgcctgccgccgcagaac
aagccaaccggcgcggaaatcaagacctgccgcccgtatcttttgtcgacgctggatgcc
aatccgtcgatcaaggctgtgcttgctctcggccggatcgcgcatgagacatttctgtcg
gccctggatcagcgtcgggcatctttcgcctttgcccacggcgcaaggcatgagcttccc
ggaactggactgacgcttttcgacagttatcactgctctcgctacaacaccaacacaggc
cgcctcaccgaggaaatgttccactcggtcttcaggcagatccgctcgtttattccttag
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