Roseibium aggregatum: QUB73_20680
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Entry
QUB73_20680 CDS
T11280
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ragg Roseibium aggregatum
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ragg03009
]
QUB73_20680
Enzymes [BR:
ragg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
QUB73_20680
Ribosome biogenesis [BR:
ragg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
QUB73_20680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WJS01568
LinkDB
All DBs
Position
complement(4518292..4518996)
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AA seq
234 aa
AA seq
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MRLVKLLANLGYGSRKEMQVAIRNGWLTDREGSRLKADAKTAHEDILFDDEPLDPAHGVV
ILMNKPLGYTCSIKDQGRLVYDLLPDRFRMRKPVLSTIGRLDKETSGALLFTDDGTFLHR
VISPKSEVPKIYEVTLDRPMKGDEGALFASGDMMLESEDKPLKPAELQVLDETHARLTLH
EGRYHQVRRMFAATGNHVTDLTRSHIGGLGLEGLEEGKWKVLSEEEKTRIFEGG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtaaaactccttgccaatctcggctatggcagccgcaaggaaatgcaggtc
gccatccgcaacggatggctcacagaccgcgagggcagccgtttgaaggcggatgccaag
accgcgcacgaggacattctcttcgacgatgagccgctcgaccccgcacacggggtggtg
atcctgatgaacaagccgcttggctacacctgctccatcaaggatcagggccggctggtc
tatgacctgttgccggaccggttccgcatgcgcaagccggttctgtccaccattggtcgg
ctggacaaggaaacgtccggtgccttgctgtttaccgacgacggcacattcctgcatcgc
gtcatctcgccgaagtccgaagttcccaagatctacgaagtgacactcgaccgcccgatg
aagggcgacgaaggcgcgctgtttgcctccggcgacatgatgctggaaagtgaagacaag
ccgctgaagccggcggagcttcaggttctggacgaaacccatgcccggctgaccctgcat
gaaggccggtatcaccaggtacgccgcatgtttgcagcaacgggcaatcacgtcaccgac
ttgacccgcagccacatcggcggcctcggtctggaaggtctcgaagagggcaaatggaaa
gtgctgtccgaagaagaaaagacacgcattttcgaaggcggatga
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