Roseibium aggregatum: QUB73_21970
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Entry
QUB73_21970 CDS
T11280
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ragg Roseibium aggregatum
Pathway
ragg00260
Glycine, serine and threonine metabolism
ragg00460
Cyanoamino acid metabolism
ragg00630
Glyoxylate and dicarboxylate metabolism
ragg00670
One carbon pool by folate
ragg00680
Methane metabolism
ragg01100
Metabolic pathways
ragg01110
Biosynthesis of secondary metabolites
ragg01120
Microbial metabolism in diverse environments
ragg01200
Carbon metabolism
ragg01230
Biosynthesis of amino acids
ragg01240
Biosynthesis of cofactors
ragg04981
Folate transport and metabolism
Module
ragg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QUB73_21970
09102 Energy metabolism
00680 Methane metabolism
QUB73_21970
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QUB73_21970
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QUB73_21970
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QUB73_21970
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QUB73_21970
Enzymes [BR:
ragg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QUB73_21970
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
WJS01813
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All DBs
Position
4804796..4806118
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AA seq
440 aa
AA seq
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MTAQDKCPWLPAVAATRIDEITQATLPLGSEAIAARIEALAEANRIIHEKDCFNLNPATN
VMNPRAEALLASGMGSRPSLGYPGDKYEMGLEAIEEIEVIAANLACEIFKSAYAEIRVAS
GALANLYAFVATTKPGDAIIAPPASVGGHVTHHAPGCAGLYGLDIHEAPVDADGYTIDLE
GLRALALKVRPKLITIGMSLNLFPHPVKEIRAIADEVGAFVLFDAAHQCGMIAGGVFSDP
LSEGAHLMTMSTYKSLGGPAGGLIVSNDQDLARKLDKIAFPGLTANFDVAKSAALAITLL
DWRDFGKAYAAEMAASAGALAAGLEAEGMPVFTTAKGTTASHQFALEAAAIGGGQAASKK
LRQAGFLACGIGLPIAPVAGDMNGLRFGTPELVRWGMTTVDMPELAKLIAEALRSNDPAA
MAGRVAKWRQSFNTLHFIRS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaagacaaatgcccctggctccccgctgtggctgccacccgtatcgacgag
atcacccaggcaactttgcctctcggatccgaagcaattgccgcgcgcatcgaagcgctg
gccgaggccaacaggatcatccacgagaaagactgtttcaatctcaaccccgcgaccaac
gtgatgaacccgcgcgccgaagccttgctggcaagcggcatggggtcccgcccctcgctc
ggctacccgggtgacaaatatgagatgggcctcgaagccatcgaggaaatcgaggtgatt
gcagcgaaccttgcctgcgagatcttcaagtcggcttatgcggaaatccgggtcgcctcg
ggcgcgctggcaaatctttatgcattcgtggcaaccacaaagccgggcgacgccatcatc
gcaccgcctgcgtccgtcggtggccacgtcactcaccatgcgccggggtgtgccggtctt
tatggcctggatatccacgaagcaccggtcgatgccgacggctacacgatcgatctggaa
ggtctgcgcgccctggccctgaaggtccggccgaagctgattaccatcggcatgagcctc
aacctgttcccgcacccggtgaaagaaattcgggccattgccgatgaagtcggcgccttt
gtcctgttcgatgcagcccatcagtgcggcatgattgccggtggcgtcttttccgacccg
ctatcggaaggcgcacatctcatgaccatgagcacctacaagagcctgggtggtcccgct
ggcgggctgatcgtcagcaatgatcaggatcttgcccgaaagctcgacaagattgccttt
ccgggtctgacagccaactttgacgttgcaaagtctgcagcgctcgccatcacccttctg
gattggcgcgatttcggcaaggcctacgctgccgaaatggccgccagcgccggtgcgctc
gccgctggtctcgaagcagagggaatgccggtgttcactaccgccaaggggacaaccgct
tcacatcagtttgccctggaagcggcagccatcggtggcggtcaggcagcttcgaagaag
cttcgccaggcagggtttctggcatgcggaatcggattgccgatagctcccgtcgccggt
gacatgaacggcctgaggttcggaacaccggaactggtccgttggggcatgacgacggtc
gacatgccagagctggccaaactgatagccgaagcgctgcgatcgaacgatccggcagcg
atggcaggacgcgtggccaaatggcgccagagtttcaacacgctccacttcatccgctcg
taa
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