Roseibium aggregatum: QUB73_21995
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Entry
QUB73_21995 CDS
T11280
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
ragg Roseibium aggregatum
Pathway
ragg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QUB73_21995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ragg03000
]
QUB73_21995
Transcription factors [BR:
ragg03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
QUB73_21995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
HTH_24
DUF7343
NirdL-like_HTH
HTH_11
HVO_A0261_N
HTH_IclR
HTH_Tnp_ISL3
TrmB
MarR
Sigma70_r4
HTH_23
HTH_3
LacI
Motif
Other DBs
NCBI-ProteinID:
WJS01818
LinkDB
All DBs
Position
complement(4810848..4811561)
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AA seq
237 aa
AA seq
DB search
MAYFDAGTPGQGAAPRMTGAPICTPSKTSFSEFGGKAVQYDTHAVIYYEGDPAKRLYELV
KGSVMLYKLLPDGRRQVVEVLRPGDIFGLAGSDENDCTAETLTNAEIQEIDLKQVERSDA
LQRTLTRCLTNQMRVLHEHAVLLGRKSAVERVASFLMHLVPDRGGVGCIGPIDDSDDGFD
LRLHMTRQEIADYLGLTIETVSRVVSDLKRRGVIRVDRADQIHLNKVCSLCQMTGMH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcttatttcgacgcgggtacccccggccagggcgcagcaccaagaatgacaggtgct
cccatctgcacacccagcaagacatcgttttcggaatttggcggcaaggctgtccaatac
gacacccatgcggtgatctattacgaaggcgatcccgcaaagcggctctatgagttggtg
aagggctcggtgatgctttacaagctgctgccggacggacgccgccaggttgtcgaagtc
cttcgtcccggtgacattttcggtcttgccggcagtgacgagaacgactgcaccgccgaa
acactcaccaatgccgaaattcaggaaatcgatctgaagcaggtcgaacgctccgatgcg
cttcagcgcacgctcaccagatgcctgaccaaccagatgcgcgtgctgcacgagcatgcg
gttctgctcggccgcaagtctgccgtcgaacgggttgctagctttctgatgcatctcgtt
ccggatcgcggtggtgtcggctgcatcgggccgattgacgacagcgacgacgggttcgac
ctgagactgcacatgacccggcaggaaatcgccgactatctgggtctgaccatcgagact
gtcagccgcgttgtgtccgatctgaaacgccggggcgttatccgcgtcgaccgcgccgac
cagatccatctcaacaaggtctgcagcctctgtcagatgacaggtatgcactga
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