Roseibium aggregatum: QUB73_26425
Help
Entry
QUB73_26425 CDS
T11280
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ragg Roseibium aggregatum
Pathway
ragg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ragg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QUB73_26425 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ragg03019
]
QUB73_26425 (pnp)
03016 Transfer RNA biogenesis [BR:
ragg03016
]
QUB73_26425 (pnp)
Enzymes [BR:
ragg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QUB73_26425 (pnp)
Messenger RNA biogenesis [BR:
ragg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QUB73_26425 (pnp)
Transfer RNA biogenesis [BR:
ragg03016
]
Prokaryotic type
tRNA degradation factors
QUB73_26425 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WJS02660
LinkDB
All DBs
Position
complement(5772685..5774814)
Genome browser
AA seq
709 aa
AA seq
DB search
MFDIHRVEVEWGGRPLVLETGKVARQADGAVMATYGETKVLATVVSAKSPKPGQDFFPLT
VNYQEKAFAAGKIPGGYFKREGRPSEHETLTSRLIDRPIRPLFADGYKNDTQVVITVLSH
DLENAPDILAMVASSAALTLSGVPFMGPIGGARVGYINGEYVLNPLVDDMPESSLDLVVA
GTNDAVLMVESEAKELNEDIMLGAVMFGHKGFQPVIDAIIKLAETAAKEPRELVLPDHSE
LFGKVKALAEAELVAAYKITSKTDRKNAVDAAKAKVVEALITNAAEGEAVESTVLGEQFK
KLEAEIVRGAILDTGTRIDGRDLSTVRAISSEVGILPRAHGSALFTRGETQGLVVATLGT
GEDEQFIDLLEGTVKSHFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAINPMMPPH
HEFPYTVRVVSEVTESNGSSSMATVCGTSLSLMDAGVPLKAPVAGIAMGLIKDGDRFAVL
SDILGDEDHLGDMDFKVAGTQDGITSLQMDIKIDGITEEIMKVALGQAKDGRIHILGEMS
KAITEARAELGEHAPRIEVMKIPVDKIREVIGSGGKVIREIVEKTGAKVNIEDDGTVKIA
SADGKAIKAAVNWINSIAAEPEVGMIYEGTVVKCVDFGAFVNFFGAKDGLVHISQLAPKK
VAKVTDVIKEGDKVWVKLMGFDERGKVRLSMKVVDQETGKEIEKKEEAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatattcatcgtgtagaagtcgagtggggcggacgcccgctcgtcctcgaaacg
ggcaaggttgcccgtcaggccgacggcgccgtcatggcgacctatggcgaaacgaaggtt
ctggcgacggttgtttccgccaagtctccgaagccgggccaggattttttcccgctcacc
gtgaactaccaggaaaaggcatttgccgctggtaagatcccgggcggctacttcaagcgt
gaaggccgtccgtcagagcacgagacgctgacgtcccgcctgatcgaccgtccgatccgc
ccgctgttcgcagacggctacaagaacgacacccaggtggtgatcaccgttctgtcgcac
gatctggaaaacgctccggacatcctggcgatggtggcttcttccgctgctctgaccctt
tccggcgttccgttcatgggtccgatcggcggtgcgcgcgttggctacatcaacggcgaa
tacgtgctgaacccgctggtcgacgacatgccggaatcctctctggatctggttgttgcc
ggtaccaatgacgccgttctgatggttgaatccgaagccaaggaactgaacgaagacatc
atgctcggcgctgtgatgttcggccacaagggcttccagccggtgatcgacgcgatcatc
aaactggctgaaaccgctgccaaggaaccgcgcgagctggtcctgccggatcattccgaa
ctgttcggcaaggtcaaggctctggccgaggccgagcttgttgccgcttacaagatcacg
tccaagaccgaccgcaagaacgcagtcgacgctgccaaggcgaaggtcgttgaagcgctg
atcaccaacgctgccgaaggcgaagccgtcgaaagcaccgttctgggcgagcagttcaag
aaactggaagctgaaatcgttcgtggcgcgatcctcgacaccggcacccgtatcgacgga
cgtgacctgtcgactgtccgtgcgatctcgtccgaagtcggcattctgccgcgtgcgcac
ggttccgcactcttcacccgtggtgaaacccagggcctggtcgttgccaccctcggcacc
ggcgaagacgagcagttcatcgatcttctggaaggcaccgtgaagtctcacttcatgctg
cactacaacttcccgccttactccgtcggtgaaaccggccgcatgggctccccgggacgc
cgcgaaatcggtcacggcaagctggcatggcgtgcgatcaacccgatgatgcctccgcat
cacgagttcccgtacaccgtccgcgtcgtttccgaagtcaccgaatccaacggttcgtct
tccatggcaaccgtctgcggcacctcgctgtcgctgatggatgccggcgttccgctgaag
gcaccggttgccggtatcgccatgggtctgatcaaggacggcgaccgttttgcggttctg
tccgacatcctgggcgatgaagatcacctcggcgacatggacttcaaggtcgccggtacc
caggacggtatcacctcgctgcagatggacatcaagatcgacggtattaccgaagagatc
atgaaggtcgctctgggtcaggccaaggacggccgtatccacatcctcggcgaaatgtcc
aaggccatcaccgaggctcgtgccgagcttggcgaacatgctccgcgcatcgaagtgatg
aagatcccggtcgacaagatccgtgaagtcatcggttcgggcggcaaggtcatccgtgaa
atcgtggaaaagaccggcgcgaaggtcaacatcgaagacgacggcaccgtcaagatcgca
tctgccgacggcaaggcgatcaaggctgccgtcaactggatcaactccatcgccgctgag
ccggaagtgggcatgatctacgaaggcaccgtcgtcaaatgcgttgatttcggcgcattc
gtgaacttcttcggtgcgaaggacggtctggtccacatctcccagctggctccgaagaaa
gttgccaaggtcaccgacgtgatcaaggaaggcgacaaggtctgggtcaagctcatgggc
ttcgacgagcgcggcaaggtccgcctgtccatgaaggttgtcgaccaggaaaccggtaag
gaaatcgaaaagaaggaagaagctgaataa
DBGET
integrated database retrieval system
