Rahnella aceris Y9602: Rahaq_0239
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Entry
Rahaq_0239 CDS
T01422
Name
(GenBank) transcriptional regulator, LysR family
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
rah
Rahnella aceris Y9602
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rah03000
]
Rahaq_0239
Transcription factors [BR:
rah03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rahaq_0239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
HTH_IclR
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADW71869
LinkDB
All DBs
Position
complement(266904..267824)
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AA seq
306 aa
AA seq
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MIDSEITFRKLEIFLAYMEKQNITRTAEQLGLSSVSVHRALHSLEEGLRCPLFIHRGRNL
LPLPAAEALLEHATQVIEQMEHGILATRRAAGFGDKRLKVGTLYSLTLETIPRLIMGLKL
RRPELELELVMGSNNDLLHKLEDGQLDAILISTSDSNVDAQRYDQLPLFQDDIFLAAPAS
AELISEGTADLRDYKQKKFVSLAEGFATYHGFQEAFQVAGFEPDIVTRVNDIFSMLSLVQ
AGVGYTLIPGRMKGVYENTVKLLPLAEAYQMRQTISLVFPHSREHDPNLLALAAESRMYA
LASRKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagtgaaatcaccttccgtaaactcgaaatcttcctcgcttatatggaaaag
caaaacatcacgcgtactgctgaacaactcggtctgagcagcgtcagcgtgcatcgcgcc
ctgcattcactggaagaaggtttacgttgcccgctgtttatccatcgtggccgcaatctg
ctgccgctgcctgcggctgaagcgctgctggagcacgcgacgcaggtcatcgagcaaatg
gaacacggtatcctggcgacccggcgcgccgccggttttggcgataagcggctgaaagtc
ggcacgttatattcgctgacgctggaaaccattccgcgcctgatcatggggctgaaactg
cgccgtccggagcttgaactggaactggtgatggggtccaacaatgatttactgcacaag
ctggaagacggtcagctggatgccatcctgatttcgaccagtgattccaatgtcgatgcc
cagcgttacgatcagttgccgctgtttcaggacgatatcttcctcgccgcaccggccagc
gcagaactgatttcagaaggcacagcggatttacgcgattacaaacagaagaaattcgtg
tcgctggctgaagggttcgccacctatcacggctttcaggaagccttccaggtcgccggt
ttcgaaccggatatcgtgacgcgggtgaatgatattttctcgatgctgagtctggtgcag
gcgggtgtcggttacacactgattcccggcaggatgaaaggcgtgtatgagaatacggta
aaattactgccactggccgaagcctaccagatgcgccagaccatttcgctggtctttccg
cacagccgcgagcacgacccgaatctgctcgccctcgccgctgaaagccggatgtatgcg
ctagcgagcagaaagcgctga
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