Rahnella aceris Y9602: Rahaq_0687
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Entry
Rahaq_0687 CDS
T01422
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rah
Rahnella aceris Y9602
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rah03021
]
Rahaq_0687
Transcription machinery [BR:
rah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rahaq_0687
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADW72314
UniProt:
A0A0H3F5Z9
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Position
732299..733285
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AA seq
328 aa
AA seq
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MSQNTLKVNELHDDVDFDENSAEAFDEKAIVEETADNDAEEELLSQTVSQRVLDATQLYL
GEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTA
RELAHKLDHEPSAEEIAEQLDKPVHDVSRMLRLNERITSVDTPLGGDSEKALLDILADEK
DNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERV
RQIQVEGLRRLREILQGQGLSIEALFRE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttaacgagttacatgatgatgtagatttcgatgagaac
agcgctgaagcctttgacgagaaagcaatagtcgaagagactgccgacaacgatgctgaa
gaagaattgttgtcgcagactgtaagccaacgagtgctggatgccactcaactgtacctc
ggtgaaatcggttattcccctctgcttaccgcagaagaggaagtttatttcgcacgacgc
gcgctgcggggagatgttccttcccgccgccgtatgattgaaagtaatctgcgtttggtg
gttaaaattgcccgccgctacagtaaccgcggtctggcactgctggatttgatcgaggaa
ggtaacctgggtctgatccgtgcggttgaaaaattcgaccctgagcgcggcttccgtttc
tctacctatgcaacatggtggatccgtcagacaatcgaacgggcgattatgaatcaaacc
cgtactattcgtctgccgattcatatcgttaaagaactgaacgtttacctgcgtaccgca
cgtgaacttgcacataaactggaccatgaaccgagcgctgaagagattgctgagcaactc
gacaaaccggtacatgacgtcagccgtatgttgcgcctgaatgaacgcatcacttctgta
gacaccccattgggtggtgactcagagaaagcgttgttagatattctggcggatgaaaaa
gacaacggcccggaagacaccacacaagacgacgatatgaaacagagtatcgtgaagtgg
ttattcgagttgaatgcaaaacagcgtgaagtgctggcgcgtcgttttggcctgttaggc
tatgaagcggcaacgctggaagatgtgggccgcgaaattggtctgacacgtgaacgtgtt
cgtcagattcaggtagaaggtttgcgtcgcctgcgtgaaatcctgcaggggcaaggactg
agtatcgaagcacttttccgtgagtaa
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