Rahnella aceris Y9602: Rahaq_3397
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Entry
Rahaq_3397 CDS
T01422
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rah
Rahnella aceris Y9602
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rah03400
]
Rahaq_3397
DNA repair and recombination proteins [BR:
rah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rahaq_3397
Archaeal homologous recombinant proteins
Rahaq_3397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
cobW
nSTAND3
TsaE
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADW74991
UniProt:
A0A0H3FD68
LinkDB
All DBs
Position
3674431..3677679
Genome browser
AA seq
1082 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNITPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNSPDGNLQAPKVELALLAD
GKILADKVRDKLDAIATLTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGLLSQRVFEQHKEARIALDGLHQRMAGIELLSEEQRQTLEAQRAELNAQEISLSQQAQQ
RQQDLNWLQQWQQVQQKQQQSQQQLTAAEQENLAAAPQLQQLARSEPAEKLRPLLNDRQR
CQDDAQRLQQLLIQLTQQQEQQIAQMTPLSLAVEQAHTARQKQAEEQRQMQTLTEEKILP
LDSEIAQWRKSLVETQQAVSESQKQAGEHSATLQQITAERQKLDEESRQHHTRQAALTEA
LNVAQQRQAELEKQYPQVVLQKRQTELMQLRPVRQQLFSLSQIFPQLNQRVQQQHKDFAQ
YQTLLAEEELRLGAIRLQCQKQLEHLNDVKALHKQEMLIVSLEAERANLQSGKACPLCGS
TSHPAIEHYQEVKPSETAQRVEKMQLEFDAAKASGIELAAKIKGLKEQQTRLQTQLEQDQ
QQLNSHTLNWQQLSAPLNLTFTLHDTADITQWLTARDEEEQQSQARLSQHEQLARALQQA
KDALNDALNAQQKVQQQSALLTERVTRLEEMQAKSQQDLVRLQKQLAEGEKSLSELNARR
LELFGERQVAQVREHLHQQQQATEQALSDVQTALHKAQEQRDQLAGQLASTQQQQLQTAA
QLTQVEQAWQQALSASGFADEAAVKLALLDDALRQQLQQRKEHLQQQLAQAQALLADARQ
QLEKHQLARPAHLSETDSDLNALTVQQAELAQQLKVLQQRLGEVKNQLESDKQRHHGQQT
LIAQIAQAQRTGDDWGYLNQMIGSSDGAKFRKFAQGLTLDHLVYLANRQLEKLHGRYLLQ
RKTSDALELQVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVTKVNGLGVSRLSSEF
KV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtttaaaaaacctgaactcgctggaaggcgaatggaaaatt
gatttcaccgccgagccgtttgccagcaacggattattcgccatcaccggtccgaccggt
gcggggaaaaccaccctgctcgatgccatttgtctggcgctttatcatcagacgccacgg
ctgaacattacaccaagccagaatgaactgatgacccgccacaccgcagaatcgctggcc
gaggtggagtttgaagtcaaaggtgtgggttaccgcgctttctggagccagcgccgcgcc
aaaaattcccctgacggcaatctgcaggcaccgaaagtcgagctggcgttactggccgac
ggcaaaattctggcggataaagtgcgcgataaactcgatgccatcgccacactgaccggg
ctggatttcggtcgtttcaccaaatccatgatgctttcacaggggcagttcgccgcgttt
ctgaatgccgatgccaacgaccgcgccgaattgctggaagaactgaccggcaccgagatt
tacggtctgctttctcaacgcgtgtttgagcaacataaagaagcgcgcattgcgctggac
ggtctgcatcagcgtatggccggaatcgaactgctcagcgaagaacagcgccagacgctc
gaagcacaacgtgctgaactgaacgcgcaggaaatcagcctcagtcagcaggcgcagcag
cgccagcaggatctgaactggctgcaacagtggcagcaggtgcagcaaaaacagcagcag
tctcagcaacaactgaccgccgcagagcaggaaaatctggccgccgcgccgcagttacag
caactggcgcgcagcgaaccggcagaaaaactgcgtccgttactcaatgatcgccagcgc
tgtcaggatgacgcgcagcgccttcagcaattactgatacaactgacgcagcagcaggag
cagcagattgcacagatgacgccgctgagtctggcggtggaacaggcacacactgcgcgg
cagaaacaggcggaagaacagcgccagatgcaaacgctgaccgaagaaaaaatcctgcca
ctggatagcgaaatcgcgcaatggcgcaaatcgctggtggaaacacaacaggcggtcagc
gagtcgcagaaacaggctggtgaacatagcgcgacgctgcagcaaatcacggcggaacgt
cagaaactggatgaggaaagccgccagcatcacacccgtcaggccgcgctgactgaagcc
cttaacgttgcacaacaacgtcaggctgaactggaaaaacagtacccgcaggtagtgtta
cagaaacgtcaaaccgaactcatgcagctccggccggtgcggcagcagctgttttcactc
tcgcaaatcttcccgcaactgaaccagcgcgtgcagcaacagcataaagattttgcgcag
taccagacgctgctggccgaagaagaactgcgtctgggcgcgatccgtctgcaatgtcag
aaacaactggaacatctgaacgacgtcaaggcgctgcataaacaggaaatgctgatcgtc
agccttgaagccgaacgtgcgaatttgcaaagcggcaaagcctgtccgctgtgcggctca
acatcacatccggcgattgaacattatcaggaggttaaaccttctgaaaccgcgcagcgc
gtcgagaaaatgcaactggaattcgatgcagcaaaagccagcggtatcgaactggcggcg
aaaattaaaggcctgaaagagcaacaaacacggctgcaaactcagcttgagcaggatcag
caacaactgaattcgcataccctgaactggcaacaactcagtgcgccgctgaatctgacg
tttacgctgcatgataccgccgacatcacgcaatggctgaccgcccgcgatgaggaagag
cagcagtcgcaggcgcgactgagccagcacgaacagctggcgcgggccctgcaacaggcc
aaagatgccctgaacgacgcactgaatgcacagcagaaagtgcagcagcaaagcgccttg
ctgacagagcgcgttacccggctggaagagatgcaggcaaaatctcagcaagacctcgtg
cggttgcaaaagcaactggcggaaggtgaaaaatccctttctgagctgaatgcccgacgc
ctcgaactgttcggagagcgtcaggttgctcaggttcgcgagcacttacatcagcaacaa
caggcgacagaacaagcgctgagtgatgtccagaccgcgctgcataaggcgcaggaacag
cgcgaccagttggccggtcagttggccagtacgcagcagcaacagttacagaccgccgca
caactgacgcaggtggaacaggcgtggcagcaggcattgagcgccagcggatttgcggat
gaagccgcagtgaaactggcgctgcttgacgacgcgttgcgccagcagcttcagcaacgc
aaagaacatctgcaacaacaactggcacaggcgcaggcattactggcggatgcccgtcag
cagctcgaaaaacatcagcttgcccgtcctgcacatctgagtgaaaccgacagtgatctt
aacgccctgacggtgcaacaggcggagctggcacaacaactgaaagtcctgcagcaacgt
ctgggcgaagtgaaaaatcagctggaaagcgacaagcaacgccaccatggtcagcagacg
ctgattgcacagattgcgcaggcacagcggaccggtgatgactggggttatctcaaccag
atgattggttccagcgacggcgcgaaattccgtaaattcgcgcagggtctgacgctcgat
catctggtgtatctggccaaccgccagctggaaaaattgcacggacgctatctgttgcag
cgcaaaaccagcgatgcgctggaactgcaggtggtcgatacctggcaggccgatgccgtg
cgcgatacccgcacgctatccggcggcgaaagcttcctggtcagcctggcactggccctg
gcgctgtccgatctggtcagcgataaaacccgtatcgactcgctgttcctcgacgaaggt
ttcggtacgctcgatgccgacacgctggataccgcgctggatgcgctcgacagcctgaat
gcctcgggtaaaaccatcggcgtgatcagccatgtcgaggcgatgaaagaccgtattccg
gtgcagatcaaagtcaccaaagtgaacggtctgggcgtcagccgcctgagcagtgaattt
aaagtctga
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integrated database retrieval system