Rahnella aceris Y9602: Rahaq_3660
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Entry
Rahaq_3660 CDS
T01422
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rah
Rahnella aceris Y9602
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rah03016
]
Rahaq_3660
Enzymes [BR:
rah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Rahaq_3660
Transfer RNA biogenesis [BR:
rah03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Rahaq_3660
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADW75250
UniProt:
A0A0H3FJU0
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All DBs
Position
3971231..3971773
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AA seq
180 aa
AA seq
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MSAERRLFFALSLPAKMQKQVIKWRADHFPADTGRPVTAANLHITLAFLGEVSALKEAAL
TRVAGRIQGQEFSVVLDDIGHWPGSGVVWIGTKRAPNALLQLASVLRSHAARNGCHQSTL
PFHPHVSLYRNATRPVAVPPATPGWQLDATEFSLYESLFERGRTRYHCLQTWPLGDTQAT
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaacgccgcctgtttttcgccttatcgctgcccgcaaaaatgcaaaagcag
gtgattaagtggcgcgcggaccacttcccggcggacactggccgccccgtcacagccgct
aatctgcatattacgctggcgtttctcggtgaagtcagcgccctcaaagaggccgcgctg
acccgcgtcgccgggcgcattcagggacaggaattcagcgtagtactggatgatattggc
cactggccgggctccggcgtggtatggattggcacaaaacgcgcgcccaatgccttgttg
caactggcgtccgtattgcgatctcacgctgcgcgcaacggttgtcatcagagtacactg
ccgtttcatccgcatgtgtcgctgtaccgcaatgcgacccgtccggtcgcggttcctccg
gccacacctggctggcaactggacgccacagaattcagtttgtacgaatccctgtttgag
cgggggcgcacccgttatcactgcctgcaaacctggccgctgggcgatacgcaggcaacc
tga
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