Rahnella aceris Y9602: Rahaq_3980
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Entry
Rahaq_3980 CDS
T01422
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
rah
Rahnella aceris Y9602
Pathway
rah02020
Two-component system
rah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rahaq_3980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rahaq_3980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rah03021
]
Rahaq_3980
Transcription machinery [BR:
rah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rahaq_3980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADW75569
UniProt:
A0A0H3FH95
LinkDB
All DBs
Position
4336161..4337594
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDSVE
TTDSEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGNDYSDDELPIYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDDTGYLTVSLDDILESVGDENVTMDEVEAVLK
RVQRFDPVGVAARDLRDCLLIQLSQYATDTPFITEARLIISEHLDLLANHDFRALMRSTR
LKEDTLKGAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKVSGVWAVELNSDSIPRLKIN
QQYAAMGNSARSDSDGQFIRSNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFELGEE
FMKPMVLADIASAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDSGGEASSTAI
RALVKKLIAAENPVKPLSDSKLATLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcagactcagccaacaactggcaatgactcctcagttacaa
caggccatccgcttgttgcaactatccacgcttgagctccagcaggagatccaactcgcg
ctggagagcaaccctctgttggaacaaaccgaccttcatgaagaaatcgactcggtagaa
accaccgacagcgaagggttagacacccgcgaggcactcgagcagaaagacatgccggaa
gagttgccgctggacgccacctgggatgagatttacaccgcaggcacgccgtcaggcacc
ggcaatgattacagcgacgatgagctaccgatttaccagggcgaaaccacgcagacactt
caggattacctgatgtggcaggtcgagctgacgccgttctctgataccgatgccgcgatt
gccacgtcaatcgtcgatgcagtggatgacaccggttacctgaccgtctcccttgacgac
attctcgaaagcgtcggtgatgaaaatgtcaccatggacgaagtcgaagccgtacttaag
cgcgttcagcgttttgatccggtgggtgtcgccgcccgtgacctgcgcgactgcctgctg
atccagctttctcaatatgcgactgacacgcctttcatcactgaagcccgtcttatcatc
agcgaacatctcgatttgctggcgaaccatgatttccgcgcacttatgcgatcaacccgg
ttaaaagaagatacactgaaaggagcgatgctcctgatccagtctcttgatccgcgtccg
ggccagtctatcaacaccggtgaatccgaatacgtgatcccggatgtgctggtgcgtaaa
gtgtcaggtgtctgggcggtagaactcaattccgacagcattccgcgtctgaagattaac
cagcagtacgccgcgatggggaattcagcacgcagcgacagcgacgggcaatttatccgc
agcaatctgcaggaagccaagtggttaatcaaaagcctggaaagccgtaacgacacgctg
ttgaaagtgacgcgctgcatcgttgagcagcagcaggcgttctttgaactgggtgaagaa
tttatgaaacctatggtactggcagatattgccagtgccgtggaaatgcacgaatcgacg
atttcacgtgtgacgacgcagaagttcctgcacagcccgcgtggcattttcgaactgaag
tatttcttctccagccatgtcagtacagacagcggtggcgaggcatcgtcaaccgcgatc
cgggcgctggtgaagaaattaatcgcagcggagaatcctgtaaaaccgctcagtgacagt
aagttagcgaccctgctttccgatcagggaattatggttgcgcgtcggactgtcgccaaa
taccgagagtctttgtccatcccgccctcaaaccaacgtaaacagttagtttga
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