Rahnella aceris Y9602: Rahaq_4308
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Entry
Rahaq_4308 CDS
T01422
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rah
Rahnella aceris Y9602
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rah03000
]
Rahaq_4308
Transcription factors [BR:
rah03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Rahaq_4308
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
TetR_N
HTH_Crp_2
MarR_2
AIRS
HTH_6
HTH_24
Sigma54_DBD
HTH_91
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ADW75894
UniProt:
A0A0H3FFQ6
LinkDB
All DBs
Position
4719264..4720334
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AA seq
356 aa
AA seq
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MLLSQFDAVARRETLEHKKELPAATMKDVAEQAGVSTATVSRALMNPEKVSAATRQKVDQ
AVMAVGYSPHALARNLKRNESRTILVIVPDICDPFFADLIQGIERTAAESGYLVLIGDCA
QQNQQEKTFINLIITKQIDGMLLLGSDLPFDASKEEQRNLPPMVMANEFAPELELPTVHI
DNLTAAFEAVHYLLKLGHHRIACIAGPKHMPLCQYRSQGYVQALRRNGLSVESKLTIHGD
FSYESGAQAVTELMALPVPPTAIFCHNDVMAIGAMFQAKKMGLRIPQDLSVVGFDDIKAS
QYTDPPLTTVAQPRFQLGRQAMLLLLEQLQGNPVQNGSLLLDSELVVRESTAAPKA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgtctcagtttgatgctgttgcaaggagagagacgttggagcacaagaaagaa
ttacccgccgcaacaatgaaagatgtggctgaacaggcaggcgtttcaacagcaaccgta
tcccgtgcattaatgaatccggagaaagtctccgccgcgactcgccagaaagttgatcag
gccgtcatggccgtcggttattctcctcatgccctggcccgcaacctgaagcgtaatgaa
tcacgcactattttggtgatcgtccccgacatctgcgatccgtttttcgccgatctgatc
caggggatcgagcgcacggccgccgaaagcggttatctggtgttgatcggtgattgtgct
cagcaaaatcagcaagagaaaacctttatcaatctgatcattaccaagcaaattgacggt
atgctgctgctcggctctgatttacctttcgatgccagcaaagaagaacaacgcaatttg
ccaccgatggtgatggcgaatgaatttgcgccggaacttgaactgccgacagtccacatt
gataacctgacggccgcgttcgaagctgtgcattatcttctcaagctggggcatcaccgt
attgcctgcatcgccgggccaaagcatatgccattgtgccagtaccgttcacaaggttat
gtgcaggcgctgcgccgcaacggactgagcgtcgagagcaagctgaccattcatggcgat
ttcagctatgaatcgggggcgcaagccgtcaccgagttgatggccctgcccgtgccgccg
acggcgattttctgccacaacgatgtgatggcgattggtgccatgttccaggcgaaaaaa
atgggtctgcgtattccgcaggatttgtcggttgtcggcttcgatgacatcaaggccagc
cagtataccgatcctccgctgacgaccgttgcgcagccgagattccagcttggccgtcag
gccatgttattattacttgagcagttacagggaaatccggtacaaaacggttcgctgctg
cttgatagcgagctggtggtgcgggaaagcactgctgccccaaaagcgtga
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