Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0086
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Entry
RA0C_0086 CDS
T02107
Name
(GenBank) 2-dehydrogene-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00541
Biosynthesis of various nucleotide sugars
rai01100
Metabolic pathways
rai01250
Biosynthesis of nucleotide sugars
Module
rai_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RA0C_0086
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rai01005
]
RA0C_0086
Enzymes [BR:
rai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RA0C_0086
Lipopolysaccharide biosynthesis proteins [BR:
rai01005
]
Lipid A
RA0C_0086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
AFD55105
UniProt:
E4TE31
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Position
complement(72822..73631)
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AA seq
269 aa
AA seq
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MIQHLDNISHKNSSNFFLVAGPCAIENGDMAMKIAEHIVKLSDKYKIPYIFKGSFKKANR
SRIDSFTGIGDEKALKILKKVGDTFGIPTTTDIHENEHATLAAQYVDVLQIPAFLVRQTD
LLVSAAKTGKCITLKKGQFLSPEAMKFAVQKIKDCDNDKVAIIERGNSFGYTDLVVDFRG
IPTMQNYAPVILDVTHSLQQPNQESGVTGGKPQLIETIAKAGIAVGADGLFIETHPDPKN
AKSDGANMLPLEQLDSLLAKLTKIREAII
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatacaacatttagataatatcagtcataaaaattcttctaatttcttcctagtagca
ggaccttgtgccatagaaaacggagatatggcaatgaaaatagcagagcatattgtaaaa
ctttcggacaaatataaaatcccttacatctttaaaggaagttttaaaaaagccaatagg
tctaggatagattcctttacaggaataggagacgagaaagctcttaaaatacttaaaaaa
gtaggcgatacgttcggaatccccacgacaacagatattcacgaaaacgaacacgctact
cttgccgcacaatatgtagatgtattacaaatacctgctttcctagtaagacaaacagat
ttactcgtgtctgctgccaaaacaggaaagtgtattactctaaaaaaaggacagttcctc
tctcccgaggcaatgaaatttgcagtgcaaaaaataaaagactgcgacaatgataaagtt
gccattatagagcgaggtaattcttttggctataccgatttggtagtggactttagaggt
atccctacaatgcaaaattacgctcctgtaatattagatgtaacccactctttacaacag
cctaaccaagagtctggtgtaactggtggaaaacctcaactcatagaaaccattgctaaa
gcagggattgccgtaggtgcagacggactatttatagaaactcacccagaccctaaaaac
gcaaaatctgatggtgctaatatgctccctctagagcaactagactcacttttagctaaa
cttaccaaaataagagaggctattatttag
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