Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0195
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Entry
RA0C_0195 CDS
T02107
Name
(GenBank) tRNA pseudouridine synthase b
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rai03016
]
RA0C_0195
Enzymes [BR:
rai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RA0C_0195
Transfer RNA biogenesis [BR:
rai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RA0C_0195
Prokaryotic type
RA0C_0195
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF276
Motif
Other DBs
NCBI-ProteinID:
AFD55207
UniProt:
H8MBX2
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All DBs
Position
150869..151567
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AA seq
232 aa
AA seq
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MTLEEIQAGQVFLVDKPLDWTSFQAVNKMKFKLKREFKLKKIKIGHAGTLDPRATGLLVV
CTGKATKTIPEIQNAPKEYHAEIKIGVQTASYDTEEPEILPQDISTITKEQILETLDSFV
GEIDQTPPIFSAIKVDGERAYNLARAGEEVELKKRKTTIYFIDNIEVDLPFVRFSVGCSK
GTYIRSLAHDIGQALGVGAYLTQLRRTKIGDFSVEQASEQFLTNEFSFTNNI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaagaaatacaagctggacaggtatttttggtagataagcctttggattgg
acttcctttcaggcggttaacaaaatgaaattcaaactgaaaagagagtttaagctaaag
aagattaaaattggtcatgcaggaacattagaccctagagccacagggcttttggtggtc
tgcacaggcaaagctaccaagactatcccagaaatacaaaatgctccaaaagagtaccac
gccgaaataaaaattggagtccagacggcttcttatgacaccgaagaaccagaaatatta
ccccaagatattagtaccatcactaaagagcaaattttagaaactttggatagctttgtg
ggagagatagaccaaacgccacctatattttctgcgattaaagtagatggcgaaagagca
tacaatcttgccagagcaggtgaagaggtggaactaaagaaacggaaaaccaccatttac
tttatagacaatatagaggttgatttgccttttgtgaggtttagtgtagggtgttccaaa
gggacttatatccgaagtttagcacacgatataggtcaggctttaggtgtaggagcttat
cttacacagctgagaaggactaagattggtgatttttctgtagaacaggcttcggaacaa
tttttaacaaatgagtttagttttaccaataatatttaa
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